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Template:STRUCTURE 2v6m
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2v6m, resolution 2.20Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2v6m]], resolution 2.20Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Mes+Binding+Site+For+Chain+D'>AC1</scene>, <scene name='pdbsite=AC2:Mes+Binding+Site+For+Chain+B'>AC2</scene> and <scene name='pdbsite=AC3:Mes+Binding+Site+For+Chain+C'>AC3</scene> | |SITE= <scene name='pdbsite=AC1:Mes+Binding+Site+For+Chain+D'>AC1</scene>, <scene name='pdbsite=AC2:Mes+Binding+Site+For+Chain+B'>AC2</scene> and <scene name='pdbsite=AC3:Mes+Binding+Site+For+Chain+C'>AC3</scene> | ||
|LIGAND= <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene> | |LIGAND= <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene> | ||
| Line 8: | Line 8: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v6m OCA], [http://www.ebi.ac.uk/pdbsum/2v6m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v6m RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v6m OCA], [http://www.ebi.ac.uk/pdbsum/2v6m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v6m RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011304 Ipr011304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015955 Ipr015955], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001236 Ipr001236], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001557 Ipr001557]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02866 PF02866], [http://pfam.sanger.ac.uk/family?acc=PF00056 PF00056]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q5SJA1 Q5SJA1]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011304 Ipr011304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015955 Ipr015955], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001236 Ipr001236], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001557 Ipr001557]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02866 PF02866], [http://pfam.sanger.ac.uk/family?acc=PF00056 PF00056]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q5SJA1 Q5SJA1]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2v6m_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2v6m_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_2v6m_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_2v6m_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 15:17, 16 February 2009
| |||||||||
| 2v6m, resolution 2.20Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | , and | ||||||||
| Ligands: | |||||||||
| Activity: | L-lactate dehydrogenase, with EC number 1.1.1.27 | ||||||||
| Domains: | LDH, MDH | ||||||||
| Related: | 2v7p | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
