This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2b3e
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
[[Image:2b3e.png|left|200px]] | [[Image:2b3e.png|left|200px]] | ||
| - | <!-- | ||
| - | The line below this paragraph, containing "STRUCTURE_2b3e", creates the "Structure Box" on the page. | ||
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| - | or leave the SCENE parameter empty for the default display. | ||
| - | --> | ||
{{STRUCTURE_2b3e| PDB=2b3e | SCENE= }} | {{STRUCTURE_2b3e| PDB=2b3e | SCENE= }} | ||
===Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.=== | ===Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.=== | ||
| - | |||
| - | <!-- | ||
| - | The line below this paragraph, {{ABSTRACT_PUBMED_16263285}}, adds the Publication Abstract to the page | ||
| - | (as it appears on PubMed at http://www.pubmed.gov), where 16263285 is the PubMed ID number. | ||
| - | --> | ||
{{ABSTRACT_PUBMED_16263285}} | {{ABSTRACT_PUBMED_16263285}} | ||
==About this Structure== | ==About this Structure== | ||
| - | Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B3E OCA]. | + | [[2b3e]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B3E OCA]. |
==Reference== | ==Reference== | ||
| - | + | <ref group="xtra">PMID:016263285</ref><ref group="xtra">PMID:018798655</ref><references group="xtra"/> | |
[[Category: Campbell, N H.]] | [[Category: Campbell, N H.]] | ||
[[Category: Evans, D A.]] | [[Category: Evans, D A.]] | ||
| Line 44: | Line 32: | ||
[[Category: Minor groove]] | [[Category: Minor groove]] | ||
[[Category: Nucleic acid]] | [[Category: Nucleic acid]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:43:17 2008'' | ||
Revision as of 18:58, 14 August 2012
Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.
Template:ABSTRACT PUBMED 16263285
About this Structure
2b3e is a 2 chain structure. Full crystallographic information is available from OCA.
Reference
- Campbell NH, Evans DA, Lee MP, Parkinson GN, Neidle S. Targeting the DNA minor groove with fused ring dicationic compounds: comparison of in silico screening and a high-resolution crystal structure. Bioorg Med Chem Lett. 2006 Jan 1;16(1):15-9. Epub 2005 Nov 2. PMID:16263285 doi:S0960-894X(05)01313-2
- Nguyen B, Neidle S, Wilson WD. A role for water molecules in DNA-ligand minor groove recognition. Acc Chem Res. 2009 Jan 20;42(1):11-21. PMID:18798655 doi:10.1021/ar800016q
Categories: Campbell, N H. | Evans, D A. | Lee, M P. | Neidle, S. | Parkinson, G N. | A2t2 | Crystal structure of b-dna | Db819 | Dickerson and drew dodecamer | Dna | Dna hydration. | Dna minor | Dna minor groove-ligand complex | Dna-drug complex | Double helix | Groove binder | Hydrated magnesium | Magnesium-water complex | Minor groove | Nucleic acid
