1o8q
From Proteopedia
(New page: 200px<br /><applet load="1o8q" size="450" color="white" frame="true" align="right" spinBox="true" caption="1o8q, resolution 2.60Å" /> '''THE ACTIVE SITE OF T...) |
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| - | [[Image:1o8q.jpg|left|200px]]<br /><applet load="1o8q" size=" | + | [[Image:1o8q.jpg|left|200px]]<br /><applet load="1o8q" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1o8q, resolution 2.60Å" /> | caption="1o8q, resolution 2.60Å" /> | ||
'''THE ACTIVE SITE OF THE MOLYBDENUM COFACTOR BIOSENTHETIC PROTEIN DOMAIN CNX1G'''<br /> | '''THE ACTIVE SITE OF THE MOLYBDENUM COFACTOR BIOSENTHETIC PROTEIN DOMAIN CNX1G'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The final step of molybdenum cofactor biosynthesis in plants is catalyzed | + | The final step of molybdenum cofactor biosynthesis in plants is catalyzed by the two-domain protein Cnx1. The G domain of Cnx1 (Cnx1G) binds molybdopterin with high affinity and transfers molybdenum to molybdopterin. Here, we describe the functional and structural characterization of structure-based Cnx1G mutants. For molybdopterin binding residues Thr542 and Ser573 were found to be important because different mutations of those residues resulted in 7- to 26-fold higher k(D) values for molybdopterin binding. Furthermore, we showed that the terminal phosphate of molybdopterin is directly involved in protein-pterin interactions as dephosphorylated molybdopterin binds with one magnitude of order lower affinity to the wild-type protein. Molybdopterin binding was not affected in mutants defective in Ser476, Asp486, or Asp515. However, molybdenum insertion was completely abolished, indicating their important role for catalysis. Based on these results we propose the binding of molybdopterin to a large depression in the structure of Cnx1G formed by beta5, alpha5, beta6, and alpha6, whereas the negatively charged depression formed by the loop between beta3 and alpha4, the N-terminal end of alpha2, the 3(10) helix, and the region between beta6 and alpha6 is involved in catalysis. |
==About this Structure== | ==About this Structure== | ||
| - | 1O8Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http:// | + | 1O8Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O8Q OCA]. |
==Reference== | ==Reference== | ||
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[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
| - | [[Category: Hecht, H | + | [[Category: Hecht, H J.]] |
[[Category: Kuper, J.]] | [[Category: Kuper, J.]] | ||
| - | [[Category: Mendel, R | + | [[Category: Mendel, R R.]] |
[[Category: Schwarz, G.]] | [[Category: Schwarz, G.]] | ||
[[Category: Winking, J.]] | [[Category: Winking, J.]] | ||
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[[Category: mutants]] | [[Category: mutants]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:14:49 2008'' |
Revision as of 12:14, 21 February 2008
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THE ACTIVE SITE OF THE MOLYBDENUM COFACTOR BIOSENTHETIC PROTEIN DOMAIN CNX1G
Overview
The final step of molybdenum cofactor biosynthesis in plants is catalyzed by the two-domain protein Cnx1. The G domain of Cnx1 (Cnx1G) binds molybdopterin with high affinity and transfers molybdenum to molybdopterin. Here, we describe the functional and structural characterization of structure-based Cnx1G mutants. For molybdopterin binding residues Thr542 and Ser573 were found to be important because different mutations of those residues resulted in 7- to 26-fold higher k(D) values for molybdopterin binding. Furthermore, we showed that the terminal phosphate of molybdopterin is directly involved in protein-pterin interactions as dephosphorylated molybdopterin binds with one magnitude of order lower affinity to the wild-type protein. Molybdopterin binding was not affected in mutants defective in Ser476, Asp486, or Asp515. However, molybdenum insertion was completely abolished, indicating their important role for catalysis. Based on these results we propose the binding of molybdopterin to a large depression in the structure of Cnx1G formed by beta5, alpha5, beta6, and alpha6, whereas the negatively charged depression formed by the loop between beta3 and alpha4, the N-terminal end of alpha2, the 3(10) helix, and the region between beta6 and alpha6 is involved in catalysis.
About this Structure
1O8Q is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.
Reference
The active site of the molybdenum cofactor biosynthetic protein domain Cnx1G., Kuper J, Winking J, Hecht HJ, Mendel RR, Schwarz G, Arch Biochem Biophys. 2003 Mar 1;411(1):36-46. PMID:12590921
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