This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 2fkl
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2fkl, resolution 2.50Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2fkl]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}} |
|GENE= APP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= APP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00006 A4_EXTRA]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00006 A4_EXTRA]</span> | ||
| Line 9: | Line 9: | ||
|COMPONENT={{GO|id=GO:0005905 | text = coated pit}}{{GO|id=GO:0005576 | text = extracellular region}}{{GO|id=GO:0005887 | text = integral to plasma membrane}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0009986 | text = cell surface}} | |COMPONENT={{GO|id=GO:0005905 | text = coated pit}}{{GO|id=GO:0005576 | text = extracellular region}}{{GO|id=GO:0005887 | text = integral to plasma membrane}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0009986 | text = cell surface}} | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008154 Ipr008154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013803 Ipr013803], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015849 Ipr015849], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011178 Ipr011178], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002223 Ipr002223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008155 Ipr008155]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02177 PF02177]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P05067 P05067]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008154 Ipr008154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013803 Ipr013803], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015849 Ipr015849], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011178 Ipr011178], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002223 Ipr002223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008155 Ipr008155]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02177 PF02177]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P05067 P05067]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2fkl_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2fkl_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 16:34, 17 February 2009
| |||||||||
| 2fkl, resolution 2.50Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Gene: | APP (Homo sapiens) | ||||||||
| Domains: | A4_EXTRA | ||||||||
| Related: | 1owt, 2fjz, 2fk1, 2fk2, 2fk3 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
