This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.

Template:STRUCTURE 1xwd

From Proteopedia

(Difference between revisions)

Jump to: navigation, search

Revision as of 19:34, 17 February 2009

1xwd, resolution 2.92Å ()

Ligands:

Non-Standard Residues:

Gene:

CGA (Homo sapiens), FSHB (Homo sapiens), FSHR (Homo sapiens)

Domains:

Hormone_6, LRRNT, GHB

Structural annotation:
Resources:	CATH : 1Xwda00, 1Xwdb00, 1Xwdd00, 1Xwde00 InterPro : Ipr000476, Ipr002400, Ipr006208, Ipr001545, Ipr000276, Ipr001611, Ipr002131, Ipr002272, Ipr000372 Pfam : PF00236, PF00007, PF01462, PF00560 UniProt : P01215, P01225, P23945

Functional annotation:
Resources:	GeneCard : CGA, FSHB, FSHR
Cellular component:	extracellular region soluble fraction membrane plasma membrane integral to membrane
Biological process:	signal transduction cell-cell signaling spermatogenesis Sertoli cell proliferation female gamete generation ovarian follicle development female pregnancy gonad development G-protein coupled receptor protein signaling pathway female gonad development
Molecular function:	hormone activity follicle-stimulating hormone activity protein heterodimerization activity signal transducer activity protein binding follicle-stimulating hormone receptor activity G-protein coupled receptor activity protein-hormone receptor activity receptor activity rhodopsin-like receptor activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1xwd"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1xwd, resolution 2.92&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1xwd]], resolution 2.92&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=NAG:SUGAR+(N-ACETYL-D-GLUCOSAMINE)'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
 |GENE= CGA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), FSHB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), FSHR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
@@ Line 11: / Line 11: @@
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1xwdA00 1Xwda00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1xwdB00 1Xwdb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1xwdD00 1Xwdd00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1xwdE00 1Xwde00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000476 Ipr000476], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002400 Ipr002400], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006208 Ipr006208], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001545 Ipr001545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001611 Ipr001611], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002131 Ipr002131], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002272 Ipr002272], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000372 Ipr000372]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00236 PF00236], [http://pfam.sanger.ac.uk/family?acc=PF00007 PF00007], [http://pfam.sanger.ac.uk/family?acc=PF01462 PF01462], [http://pfam.sanger.ac.uk/family?acc=PF00560 PF00560]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P01215 P01215], [http://ca.expasy.org/cgi-bin/niceprot.pl?P01225 P01225], [http://ca.expasy.org/cgi-bin/niceprot.pl?P23945 P23945]</span>
 |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=CGA CGA], [http://www.genecards.org/cgi-bin/carddisp.pl?id=FSHB FSHB], [http://www.genecards.org/cgi-bin/carddisp.pl?id=FSHR FSHR]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1xwd_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1xwd_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1xwd_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>E [x]</text>
+<name>jmb_1xwd_E</name>
+<title>toggle chain E</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1xwd_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>F [x]</text>
+<name>jmb_1xwd_F</name>
+<title>toggle chain F</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1xwd

From Proteopedia

Revision as of 19:34, 17 February 2009

Proteopedia Page Contributors and Editors (what is this?)

Views

Personal tools

Navigation

Search

Toolbox