1rdw
From Proteopedia
(New page: 200px<br /><applet load="1rdw" size="450" color="white" frame="true" align="right" spinBox="true" caption="1rdw, resolution 2.3Å" /> '''Actin Crystal Dynamic...) |
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| - | [[Image:1rdw.gif|left|200px]]<br /><applet load="1rdw" size=" | + | [[Image:1rdw.gif|left|200px]]<br /><applet load="1rdw" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1rdw, resolution 2.3Å" /> | caption="1rdw, resolution 2.3Å" /> | ||
'''Actin Crystal Dynamics: Structural Implications for F-actin Nucleation, Polymerization and Branching Mediated by the Anti-parallel Dimer'''<br /> | '''Actin Crystal Dynamics: Structural Implications for F-actin Nucleation, Polymerization and Branching Mediated by the Anti-parallel Dimer'''<br /> | ||
==Overview== | ==Overview== | ||
| - | Actin filament nucleation, polymerization, and branching are crucial steps | + | Actin filament nucleation, polymerization, and branching are crucial steps in many forms of cell motility, cell shape, and intracellular organelle movements in a wide range of organisms. Previous biochemical data suggests that an anti-parallel actin dimer can incorporate itself into growing filamentous actin (F-actin) and has a role in branching. Furthermore, it is a widespread belief that nucleation is spawned from an actin trimer complex. Here we present the structures of actin dimers and trimers in two tetragonal crystal systems P4(3)2(1)2 and P4(3). Both crystal systems formed by an induced condensation transformation of a previously reported orthorhombic crystal system P2(1)2(1)2(1). Comparison between the three crystal systems demonstrates the dynamics and flexibility of actin-actin interactions. The dimer and trimer actin rearrangements observed between the three crystal systems may provide insight to in vivo actin-actin interactions that occur during the nucleation, polymerization, and branching of F-actin. |
==About this Structure== | ==About this Structure== | ||
| - | 1RDW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus] with MG, ATP and LAR as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http:// | + | 1RDW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=ATP:'>ATP</scene> and <scene name='pdbligand=LAR:'>LAR</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RDW OCA]. |
==Reference== | ==Reference== | ||
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[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Agbandje-Mckenna, M.]] | [[Category: Agbandje-Mckenna, M.]] | ||
| - | [[Category: Bubb, M | + | [[Category: Bubb, M R.]] |
[[Category: Govindasamy, L.]] | [[Category: Govindasamy, L.]] | ||
[[Category: Mckenna, R.]] | [[Category: Mckenna, R.]] | ||
[[Category: Reutzel, R.]] | [[Category: Reutzel, R.]] | ||
| - | [[Category: Yarmola, E | + | [[Category: Yarmola, E G.]] |
[[Category: Yoshioka, C.]] | [[Category: Yoshioka, C.]] | ||
[[Category: ATP]] | [[Category: ATP]] | ||
| Line 28: | Line 28: | ||
[[Category: polymerization]] | [[Category: polymerization]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:49:49 2008'' |
Revision as of 12:49, 21 February 2008
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Actin Crystal Dynamics: Structural Implications for F-actin Nucleation, Polymerization and Branching Mediated by the Anti-parallel Dimer
Overview
Actin filament nucleation, polymerization, and branching are crucial steps in many forms of cell motility, cell shape, and intracellular organelle movements in a wide range of organisms. Previous biochemical data suggests that an anti-parallel actin dimer can incorporate itself into growing filamentous actin (F-actin) and has a role in branching. Furthermore, it is a widespread belief that nucleation is spawned from an actin trimer complex. Here we present the structures of actin dimers and trimers in two tetragonal crystal systems P4(3)2(1)2 and P4(3). Both crystal systems formed by an induced condensation transformation of a previously reported orthorhombic crystal system P2(1)2(1)2(1). Comparison between the three crystal systems demonstrates the dynamics and flexibility of actin-actin interactions. The dimer and trimer actin rearrangements observed between the three crystal systems may provide insight to in vivo actin-actin interactions that occur during the nucleation, polymerization, and branching of F-actin.
About this Structure
1RDW is a Single protein structure of sequence from Oryctolagus cuniculus with , and as ligands. Full crystallographic information is available from OCA.
Reference
Actin crystal dynamics: structural implications for F-actin nucleation, polymerization, and branching mediated by the anti-parallel dimer., Reutzel R, Yoshioka C, Govindasamy L, Yarmola EG, Agbandje-McKenna M, Bubb MR, McKenna R, J Struct Biol. 2004 Jun;146(3):291-301. PMID:15099571
Page seeded by OCA on Thu Feb 21 14:49:49 2008
