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Template:STRUCTURE 1f88

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Revision as of 13:48, 17 February 2009

1f88, resolution 2.80Å ()

Sites:

, , , , , , , , , , , , , , , , , and

Ligands:

, ,

Non-Standard Residues:

Domains:

7tm_1

Structural annotation:
Resources:	CATH : 1F88A00, 1F88B00 InterPro : Ipr000276, Ipr000732, Ipr001760, Ipr017452 Pfam : PF00001 SCOP : d1f88a_, d1f88b_ UniProt : P02699

Functional annotation:
Cellular component:	membrane photoreceptor outer segment integral to membrane plasma membrane
Biological process:	signal transduction visual perception detection of light stimulus phototransduction response to stimulus G-protein coupled receptor protein signaling pathway protein-chromophore linkage
Molecular function:	rhodopsin-like receptor activity photoreceptor activity signal transducer activity receptor activity G-protein coupled receptor activity protein binding

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1f88"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1f88, resolution 2.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f88]], resolution 2.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |SITE= <scene name='pdbsite=AC1:Hg+Binding+Site+For+Residue+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Hg+Binding+Site+For+Residue+B+902'>AC2</scene>, <scene name='pdbsite=AC3:Hg+Binding+Site+For+Residue+B+904'>AC3</scene>, <scene name='pdbsite=AC4:Hg+Binding+Site+For+Residue+A+903'>AC4</scene>, <scene name='pdbsite=AC5:Hg+Binding+Site+For+Residue+B+906'>AC5</scene>, <scene name='pdbsite=AC6:Hg+Binding+Site+For+Residue+A+905'>AC6</scene>, <scene name='pdbsite=AC7:Man+Binding+Site+For+Residue+B+603'>AC7</scene>, <scene name='pdbsite=AC8:Nag+Binding+Site+For+Residue+A+501'>AC8</scene>, <scene name='pdbsite=AC9:Nag+Binding+Site+For+Residue+A+502'>AC9</scene>, <scene name='pdbsite=BC1:Nag+Binding+Site+For+Residue+A+701'>BC1</scene>, <scene name='pdbsite=BC2:Nag+Binding+Site+For+Residue+B+801'>BC2</scene>, <scene name='pdbsite=BC3:Nag+Binding+Site+For+Residue+B+802'>BC3</scene>, <scene name='pdbsite=BC4:Nag+Binding+Site+For+Residue+A+702'>BC4</scene>, <scene name='pdbsite=BC5:Nag+Binding+Site+For+Residue+B+601'>BC5</scene>, <scene name='pdbsite=BC6:Nag+Binding+Site+For+Residue+B+602'>BC6</scene>, <scene name='pdbsite=BC7:Ret+Binding+Site+For+Residue+A+977'>BC7</scene>, <scene name='pdbsite=BC8:Ret+Binding+Site+For+Residue+B+978'>BC8</scene>, <scene name='pdbsite=BC9:Zn+Binding+Site+For+Residue+A+907'>BC9</scene> and <scene name='pdbsite=CC1:Zn+Binding+Site+For+Residue+B+908'>CC1</scene>
 |LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
@@ Line 10: / Line 10: @@
 |COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0001750 | text = photoreceptor outer segment}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0005886 | text = plasma membrane}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f88A00 1F88A00], [http://www.cathdb.info/domain/1f88B00 1F88B00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000732 Ipr000732], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001760 Ipr001760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017452 Ipr017452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00001 PF00001]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43429 d1f88a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43430 d1f88b_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02699 P02699]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1f88_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1f88_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1f88

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Revision as of 13:48, 17 February 2009

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