Template:STRUCTURE 1f88
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1f88, resolution 2.80Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f88]], resolution 2.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Hg+Binding+Site+For+Residue+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Hg+Binding+Site+For+Residue+B+902'>AC2</scene>, <scene name='pdbsite=AC3:Hg+Binding+Site+For+Residue+B+904'>AC3</scene>, <scene name='pdbsite=AC4:Hg+Binding+Site+For+Residue+A+903'>AC4</scene>, <scene name='pdbsite=AC5:Hg+Binding+Site+For+Residue+B+906'>AC5</scene>, <scene name='pdbsite=AC6:Hg+Binding+Site+For+Residue+A+905'>AC6</scene>, <scene name='pdbsite=AC7:Man+Binding+Site+For+Residue+B+603'>AC7</scene>, <scene name='pdbsite=AC8:Nag+Binding+Site+For+Residue+A+501'>AC8</scene>, <scene name='pdbsite=AC9:Nag+Binding+Site+For+Residue+A+502'>AC9</scene>, <scene name='pdbsite=BC1:Nag+Binding+Site+For+Residue+A+701'>BC1</scene>, <scene name='pdbsite=BC2:Nag+Binding+Site+For+Residue+B+801'>BC2</scene>, <scene name='pdbsite=BC3:Nag+Binding+Site+For+Residue+B+802'>BC3</scene>, <scene name='pdbsite=BC4:Nag+Binding+Site+For+Residue+A+702'>BC4</scene>, <scene name='pdbsite=BC5:Nag+Binding+Site+For+Residue+B+601'>BC5</scene>, <scene name='pdbsite=BC6:Nag+Binding+Site+For+Residue+B+602'>BC6</scene>, <scene name='pdbsite=BC7:Ret+Binding+Site+For+Residue+A+977'>BC7</scene>, <scene name='pdbsite=BC8:Ret+Binding+Site+For+Residue+B+978'>BC8</scene>, <scene name='pdbsite=BC9:Zn+Binding+Site+For+Residue+A+907'>BC9</scene> and <scene name='pdbsite=CC1:Zn+Binding+Site+For+Residue+B+908'>CC1</scene> | |SITE= <scene name='pdbsite=AC1:Hg+Binding+Site+For+Residue+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Hg+Binding+Site+For+Residue+B+902'>AC2</scene>, <scene name='pdbsite=AC3:Hg+Binding+Site+For+Residue+B+904'>AC3</scene>, <scene name='pdbsite=AC4:Hg+Binding+Site+For+Residue+A+903'>AC4</scene>, <scene name='pdbsite=AC5:Hg+Binding+Site+For+Residue+B+906'>AC5</scene>, <scene name='pdbsite=AC6:Hg+Binding+Site+For+Residue+A+905'>AC6</scene>, <scene name='pdbsite=AC7:Man+Binding+Site+For+Residue+B+603'>AC7</scene>, <scene name='pdbsite=AC8:Nag+Binding+Site+For+Residue+A+501'>AC8</scene>, <scene name='pdbsite=AC9:Nag+Binding+Site+For+Residue+A+502'>AC9</scene>, <scene name='pdbsite=BC1:Nag+Binding+Site+For+Residue+A+701'>BC1</scene>, <scene name='pdbsite=BC2:Nag+Binding+Site+For+Residue+B+801'>BC2</scene>, <scene name='pdbsite=BC3:Nag+Binding+Site+For+Residue+B+802'>BC3</scene>, <scene name='pdbsite=BC4:Nag+Binding+Site+For+Residue+A+702'>BC4</scene>, <scene name='pdbsite=BC5:Nag+Binding+Site+For+Residue+B+601'>BC5</scene>, <scene name='pdbsite=BC6:Nag+Binding+Site+For+Residue+B+602'>BC6</scene>, <scene name='pdbsite=BC7:Ret+Binding+Site+For+Residue+A+977'>BC7</scene>, <scene name='pdbsite=BC8:Ret+Binding+Site+For+Residue+B+978'>BC8</scene>, <scene name='pdbsite=BC9:Zn+Binding+Site+For+Residue+A+907'>BC9</scene> and <scene name='pdbsite=CC1:Zn+Binding+Site+For+Residue+B+908'>CC1</scene> | ||
|LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
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|COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0001750 | text = photoreceptor outer segment}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0005886 | text = plasma membrane}} | |COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0001750 | text = photoreceptor outer segment}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0005886 | text = plasma membrane}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f88A00 1F88A00], [http://www.cathdb.info/domain/1f88B00 1F88B00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000732 Ipr000732], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001760 Ipr001760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017452 Ipr017452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00001 PF00001]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43429 d1f88a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43430 d1f88b_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02699 P02699]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f88A00 1F88A00], [http://www.cathdb.info/domain/1f88B00 1F88B00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000732 Ipr000732], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001760 Ipr001760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017452 Ipr017452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00001 PF00001]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43429 d1f88a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43430 d1f88b_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02699 P02699]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1f88_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_1f88_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 13:48, 17 February 2009
