1u68

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(New page: 200px<br /><applet load="1u68" size="450" color="white" frame="true" align="right" spinBox="true" caption="1u68, resolution 2.40&Aring;" /> '''DHNA 7,8 DIHYDRONEOP...)
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caption="1u68, resolution 2.40&Aring;" />
caption="1u68, resolution 2.40&Aring;" />
'''DHNA 7,8 DIHYDRONEOPTERIN COMPLEX'''<br />
'''DHNA 7,8 DIHYDRONEOPTERIN COMPLEX'''<br />
==Overview==
==Overview==
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Potent inhibitors of 7,8-dihydroneopterin aldolase (DHNA; EC 4.1.2.25), have been discovered using CrystaLEAD X-ray crystallographic, high-throughput screening followed by structure-directed optimization., Screening of a 10 000 compound random library provided several low, affinity leads and their corresponding X-ray crystal structures bound to, the enzyme. The presence of a common structural feature in each of the, leads suggested a strategy for the construction of a directed library of, approximately 1000 compounds that were screened for inhibitory activity in, a traditional enzyme assay. Several lead compounds with IC(50) values of, about 1 microM against DHNA were identified, and crystal structures of, their enzyme-bound complexes were obtained by cocrystallization., Structure-directed optimization of one of the leads thus identified, afforded potent inhibitors with submicromolar IC(50) values.
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Potent inhibitors of 7,8-dihydroneopterin aldolase (DHNA; EC 4.1.2.25) have been discovered using CrystaLEAD X-ray crystallographic high-throughput screening followed by structure-directed optimization. Screening of a 10 000 compound random library provided several low affinity leads and their corresponding X-ray crystal structures bound to the enzyme. The presence of a common structural feature in each of the leads suggested a strategy for the construction of a directed library of approximately 1000 compounds that were screened for inhibitory activity in a traditional enzyme assay. Several lead compounds with IC(50) values of about 1 microM against DHNA were identified, and crystal structures of their enzyme-bound complexes were obtained by cocrystallization. Structure-directed optimization of one of the leads thus identified afforded potent inhibitors with submicromolar IC(50) values.
==About this Structure==
==About this Structure==
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1U68 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] with NPR as [http://en.wikipedia.org/wiki/ligand ligand]. This structure superseeds the now removed PDB entry 1RR5. Active as [http://en.wikipedia.org/wiki/Dihydroneopterin_aldolase Dihydroneopterin aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.25 4.1.2.25] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1U68 OCA].
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1U68 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus] with <scene name='pdbligand=NPR:'>NPR</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. This structure supersedes the now removed PDB entry 1RR5. Active as [http://en.wikipedia.org/wiki/Dihydroneopterin_aldolase Dihydroneopterin aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.25 4.1.2.25] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U68 OCA].
==Reference==
==Reference==
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
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[[Category: Betz, S.F.]]
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[[Category: Betz, S F.]]
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[[Category: Beutel, B.A.]]
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[[Category: Beutel, B A.]]
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[[Category: Condroski, K.R.]]
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[[Category: Condroski, K R.]]
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[[Category: Harlan, J.E.]]
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[[Category: Harlan, J E.]]
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[[Category: Jakob, C.G.]]
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[[Category: Jakob, C G.]]
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[[Category: Lerner, C.G.]]
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[[Category: Lerner, C G.]]
[[Category: Magdalinos, P.]]
[[Category: Magdalinos, P.]]
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[[Category: McCall, J.O.]]
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[[Category: McCall, J O.]]
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[[Category: Meadows, R.P.]]
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[[Category: Meadows, R P.]]
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[[Category: Merrick, S.M.]]
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[[Category: Merrick, S M.]]
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[[Category: Nienaber, V.L.]]
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[[Category: Nienaber, V L.]]
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[[Category: Sanders, W.J.]]
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[[Category: Sanders, W J.]]
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[[Category: Severin, J.M.]]
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[[Category: Severin, J M.]]
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[[Category: Stamper, G.F.]]
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[[Category: Stamper, G F.]]
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[[Category: Stoll, V.S.]]
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[[Category: Stoll, V S.]]
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[[Category: Swanson, S.J.]]
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[[Category: Swanson, S J.]]
[[Category: Wagner, R.]]
[[Category: Wagner, R.]]
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[[Category: Walter, K.A.]]
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[[Category: Walter, K A.]]
[[Category: NPR]]
[[Category: NPR]]
[[Category: 7]]
[[Category: 7]]
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[[Category: dhna]]
[[Category: dhna]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:20:59 2008''

Revision as of 13:20, 21 February 2008


1u68, resolution 2.40Å

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DHNA 7,8 DIHYDRONEOPTERIN COMPLEX

Overview

Potent inhibitors of 7,8-dihydroneopterin aldolase (DHNA; EC 4.1.2.25) have been discovered using CrystaLEAD X-ray crystallographic high-throughput screening followed by structure-directed optimization. Screening of a 10 000 compound random library provided several low affinity leads and their corresponding X-ray crystal structures bound to the enzyme. The presence of a common structural feature in each of the leads suggested a strategy for the construction of a directed library of approximately 1000 compounds that were screened for inhibitory activity in a traditional enzyme assay. Several lead compounds with IC(50) values of about 1 microM against DHNA were identified, and crystal structures of their enzyme-bound complexes were obtained by cocrystallization. Structure-directed optimization of one of the leads thus identified afforded potent inhibitors with submicromolar IC(50) values.

About this Structure

1U68 is a Single protein structure of sequence from Staphylococcus aureus with as ligand. This structure supersedes the now removed PDB entry 1RR5. Active as Dihydroneopterin aldolase, with EC number 4.1.2.25 Full crystallographic information is available from OCA.

Reference

Discovery of potent inhibitors of dihydroneopterin aldolase using CrystaLEAD high-throughput X-ray crystallographic screening and structure-directed lead optimization., Sanders WJ, Nienaber VL, Lerner CG, McCall JO, Merrick SM, Swanson SJ, Harlan JE, Stoll VS, Stamper GF, Betz SF, Condroski KR, Meadows RP, Severin JM, Walter KA, Magdalinos P, Jakob CG, Wagner R, Beutel BA, J Med Chem. 2004 Mar 25;47(7):1709-18. PMID:15027862

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