Template:STRUCTURE 2v1x
From Proteopedia
(Difference between revisions)
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- | {{ | + | {{Structure |
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2v1x, resolution 2.00Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2v1x]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Mg+A+1594'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Zn+A+1595'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Cl+A+1596'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Cl+A+1598'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Cl+A+1599'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Mg+B+1594'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Zn+B+1595'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Cl+B+1596'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Cl+B+1598'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Cl+B+1599'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Adp+A+1593'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Adp+B+1593'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+B+1601'>BC4</scene> and <scene name='pdbsite=BC5:Binding+Site+For+Residue+Edo+B+1602'>BC5</scene> | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Mg+A+1594'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Zn+A+1595'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Cl+A+1596'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Cl+A+1598'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Cl+A+1599'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Mg+B+1594'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Zn+B+1595'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Cl+B+1596'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Cl+B+1598'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Cl+B+1599'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Adp+A+1593'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Adp+B+1593'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Edo+B+1601'>BC4</scene> and <scene name='pdbsite=BC5:Binding+Site+For+Residue+Edo+B+1602'>BC5</scene> | ||
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
+ | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00269 DEXHc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00079 HELICc]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v1x OCA], [http://www.ebi.ac.uk/pdbsum/2v1x PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v1x RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2v1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v1x OCA], [http://www.ebi.ac.uk/pdbsum/2v1x PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2v1x RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001650 Ipr001650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018329 Ipr018329], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014021 Ipr014021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014001 Ipr014001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011545 Ipr011545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004589 Ipr004589]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00271 PF00271], [http://pfam.sanger.ac.uk/family?acc=PF00270 PF00270]<br>UniProt : [http://www.uniprot.org/uniprot/P46063 P46063]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001650 Ipr001650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018329 Ipr018329], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014021 Ipr014021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014001 Ipr014001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011545 Ipr011545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004589 Ipr004589]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00271 PF00271], [http://pfam.sanger.ac.uk/family?acc=PF00270 PF00270]<br>UniProt : [http://www.uniprot.org/uniprot/P46063 P46063]</span> | ||
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=RECQL RECQL]</span> | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=RECQL RECQL]</span> | ||
+ | |CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script>if (consurf_A!=1); select:A; spacefill off;color translucent -1; consurf_A = 1; else; select:A; spacefill on; color opaque;consurf_A = 0; endif;</script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>if (document.getElementById(elementClicked).value=='A [x]') {document.getElementById(elementClicked).value='A [ ]';} | ||
+ | else {document.getElementById(elementClicked).value='A [x]';}</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script>if (consurf_B!=1); select:B; spacefill off;color translucent -1; consurf_B = 1; else; select:B; spacefill on; color opaque;consurf_B = 0; endif;</script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_B</name> | ||
+ | <title>toggle chain B</title> | ||
+ | <jsscript>if (document.getElementById(elementClicked).value=='B [x]') {document.getElementById(elementClicked).value='B [ ]';} | ||
+ | else {document.getElementById(elementClicked).value='B [x]';}</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Revision as of 09:20, 11 February 2009
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2v1x, resolution 2.00Å () | |||||||||
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Sites: | , , , , , , , , , , , , and | ||||||||
Ligands: | , , , , | ||||||||
Domains: | DEXHc, HELICc | ||||||||
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Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
Coordinates: | save as pdb, mmCIF, xml |