This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Template:STRUCTURE 1akh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1akh]], resolution 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1akh]], [[Resolution|resolution]] 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|GENE= MAT A1 RESIDUES 66 - 126 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]), MAT ALPHA2 RESIDUES 128 - 210 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
|GENE= MAT A1 RESIDUES 66 - 126 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]), MAT ALPHA2 RESIDUES 128 - 210 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086 homeodomain], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00046 Homeobox]</span>
 
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1akh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1akh OCA], [http://www.ebi.ac.uk/pdbsum/1akh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1akh RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1akh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1akh OCA], [http://www.ebi.ac.uk/pdbsum/1akh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1akh RCSB]</span>
|FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0003714 | text = transcription corepressor activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0008301 | text = DNA bending activity}}
|FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0003714 | text = transcription corepressor activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0008301 | text = DNA bending activity}}
Line 8: Line 7:
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhA00 1Akha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhB00 1Akhb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001356 Ipr001356], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000047 Ipr000047], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012287 Ipr012287], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009057 Ipr009057]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00046 PF00046]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15980 d1akha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15985 d1akhb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P01366 P01366], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q6B2C0 Q6B2C0]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhA00 1Akha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhB00 1Akhb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001356 Ipr001356], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000047 Ipr000047], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012287 Ipr012287], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009057 Ipr009057]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00046 PF00046]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15980 d1akha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15985 d1akhb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P01366 P01366], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q6B2C0 Q6B2C0]</span>
-
|CONSURF={{!}}-
+
|uPDB=1AKH|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Revision as of 12:51, 28 April 2011

Drag the structure with the mouse to rotate
1akh, resolution 2.50Å ()
Gene: MAT A1 RESIDUES 66 - 126 (Saccharomyces cerevisiae), MAT ALPHA2 RESIDUES 128 - 210 (Saccharomyces cerevisiae)
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1akh"
Personal tools