This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3bkz
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
[[Image:3bkz.png|left|200px]] | [[Image:3bkz.png|left|200px]] | ||
| - | <!-- | ||
| - | The line below this paragraph, containing "STRUCTURE_3bkz", creates the "Structure Box" on the page. | ||
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| - | or leave the SCENE parameter empty for the default display. | ||
| - | --> | ||
{{STRUCTURE_3bkz| PDB=3bkz | SCENE= }} | {{STRUCTURE_3bkz| PDB=3bkz | SCENE= }} | ||
===X-ray structure of E coli AlkB crosslinked to dsDNA in the active site=== | ===X-ray structure of E coli AlkB crosslinked to dsDNA in the active site=== | ||
| - | |||
| - | <!-- | ||
| - | The line below this paragraph, {{ABSTRACT_PUBMED_18432238}}, adds the Publication Abstract to the page | ||
| - | (as it appears on PubMed at http://www.pubmed.gov), where 18432238 is the PubMed ID number. | ||
| - | --> | ||
{{ABSTRACT_PUBMED_18432238}} | {{ABSTRACT_PUBMED_18432238}} | ||
==About this Structure== | ==About this Structure== | ||
| - | + | [[3bkz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BKZ OCA]. | |
==Reference== | ==Reference== | ||
| - | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:018432238</ref><references group="xtra"/> |
| - | [[Category: Escherichia coli | + | [[Category: Escherichia coli k-12]] |
[[Category: He, C.]] | [[Category: He, C.]] | ||
[[Category: Yang, C G.]] | [[Category: Yang, C G.]] | ||
| Line 32: | Line 20: | ||
[[Category: Dioxygenase]] | [[Category: Dioxygenase]] | ||
[[Category: Dna repair]] | [[Category: Dna repair]] | ||
| - | [[Category: Oxidoreductase | + | [[Category: Oxidoreductase-dna complex]] |
[[Category: Protein dna interaction]] | [[Category: Protein dna interaction]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:58:53 2009'' | ||
Revision as of 21:19, 7 January 2013
X-ray structure of E coli AlkB crosslinked to dsDNA in the active site
Template:ABSTRACT PUBMED 18432238
About this Structure
3bkz is a 3 chain structure with sequence from Escherichia coli k-12. Full crystallographic information is available from OCA.
Reference
- Yang CG, Yi C, Duguid EM, Sullivan CT, Jian X, Rice PA, He C. Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA. Nature. 2008 Apr 24;452(7190):961-5. PMID:18432238 doi:http://dx.doi.org/10.1038/nature06889
