This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1tqf
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1tqf]], resolution 1.80Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1tqf]], [[Resolution|resolution]] 1.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=32P:3-{2-[(5-AMINOPENTYL)AMINO]-2-OXOETHOXY}-5-({[1-(4-FLUOROPHENYL)ETHYL]AMINO}CARBONYL)PHENYL+PHENYLMETHANESULFONATE'>32P</scene> | |LIGAND= <scene name='pdbligand=32P:3-{2-[(5-AMINOPENTYL)AMINO]-2-OXOETHOXY}-5-({[1-(4-FLUOROPHENYL)ETHYL]AMINO}CARBONYL)PHENYL+PHENYLMETHANESULFONATE'>32P</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span> | ||
|GENE= BACE1, BACE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= BACE1, BACE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00026 Asp]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tqf OCA], [http://www.ebi.ac.uk/pdbsum/1tqf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tqf RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tqf OCA], [http://www.ebi.ac.uk/pdbsum/1tqf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tqf RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1tqfA01 1Tqfa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1tqfA02 1Tqfa02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009120 Ipr009120], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009119 Ipr009119], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001461 Ipr001461], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009007 Ipr009007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001969 Ipr001969]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00026 PF00026]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56817 P56817]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1tqfA01 1Tqfa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1tqfA02 1Tqfa02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009120 Ipr009120], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009119 Ipr009119], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001461 Ipr001461], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009007 Ipr009007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001969 Ipr001969]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00026 PF00026]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56817 P56817]</span> | ||
| - | | | + | |uPDB=1TQF|CONSURF={{!}}- |
| - | |CONSURF={{!}}- | + | |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Current revision
| |||||||||
| 1tqf, resolution 1.80Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Gene: | BACE1, BACE (Homo sapiens) | ||||||||
| Activity: | Memapsin 2, with EC number 3.4.23.46 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

