This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1lqb
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lqb]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lqb]], [[Resolution|resolution]] 2.00Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | |LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span> | ||
|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene> | |NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span> | ||
| Line 9: | Line 8: | ||
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005829 | text = cytosol}}{{GO|id=GO:0005739 | text = mitochondrion}}{{GO|id=GO:0005783 | text = endoplasmic reticulum}} | |COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005829 | text = cytosol}}{{GO|id=GO:0005739 | text = mitochondrion}}{{GO|id=GO:0005783 | text = endoplasmic reticulum}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span> | ||
| - | | | + | |uPDB=1LQB|CONSURF={{!}}- |
| - | |CONSURF={{!}}- | + | |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Revision as of 04:57, 27 July 2012

