2g0q
From Proteopedia
(New page: 200px<br /><applet load="2g0q" size="450" color="white" frame="true" align="right" spinBox="true" caption="2g0q" /> '''Solution structure of At5g39720.1 from Arabi...) |
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| - | [[Image:2g0q.gif|left|200px]]<br /><applet load="2g0q" size=" | + | [[Image:2g0q.gif|left|200px]]<br /><applet load="2g0q" size="350" color="white" frame="true" align="right" spinBox="true" |
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'''Solution structure of At5g39720.1 from Arabidopsis thaliana'''<br /> | '''Solution structure of At5g39720.1 from Arabidopsis thaliana'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The three-dimensional structure of Arabidopsis thaliana protein | + | The three-dimensional structure of Arabidopsis thaliana protein At5g39720.1 was determined by NMR spectroscopy. It is the first representative structure of Pfam family PF06094, which contains protein sequences similar to that of AIG2, an A. thaliana protein of unknown function induced upon infection by the bacterial pathogen Pseudomonas syringae. The At5g39720.1 structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. A structural homology search revealed similarity to three members of Pfam family UPF0131. Conservation of residues in a hydrophilic cavity able to bind small ligands in UPF0131 proteins suggests that this may also serve as an active site in AIG2-like proteins. |
==About this Structure== | ==About this Structure== | ||
| - | 2G0Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http:// | + | 2G0Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G0Q OCA]. |
==Reference== | ==Reference== | ||
| - | Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family., Lytle BL, Peterson FC, Tyler EM, Newman CL, Vinarov DA, Markley JL, Volkman BF, Acta | + | Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family., Lytle BL, Peterson FC, Tyler EM, Newman CL, Vinarov DA, Markley JL, Volkman BF, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt, 6):490-3. Epub 2006 May 31. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16754964 16754964] |
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
| - | [[Category: CESG, Center | + | [[Category: CESG, Center for Eukaryotic Structural Genomics.]] |
| - | [[Category: Lytle, B | + | [[Category: Lytle, B L.]] |
| - | [[Category: Peterson, F | + | [[Category: Peterson, F C.]] |
| - | [[Category: Volkman, B | + | [[Category: Volkman, B F.]] |
| - | [[Category: at5g39720 | + | [[Category: at5g39720 1]] |
[[Category: center for eukaryotic structural genomics]] | [[Category: center for eukaryotic structural genomics]] | ||
[[Category: cesg]] | [[Category: cesg]] | ||
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[[Category: structural genomics]] | [[Category: structural genomics]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:27:03 2008'' |
Revision as of 15:27, 21 February 2008
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Solution structure of At5g39720.1 from Arabidopsis thaliana
Overview
The three-dimensional structure of Arabidopsis thaliana protein At5g39720.1 was determined by NMR spectroscopy. It is the first representative structure of Pfam family PF06094, which contains protein sequences similar to that of AIG2, an A. thaliana protein of unknown function induced upon infection by the bacterial pathogen Pseudomonas syringae. The At5g39720.1 structure consists of a five-stranded beta-barrel surrounded by two alpha-helices and a small beta-sheet. A long flexible alpha-helix protrudes from the structure at the C-terminal end. A structural homology search revealed similarity to three members of Pfam family UPF0131. Conservation of residues in a hydrophilic cavity able to bind small ligands in UPF0131 proteins suggests that this may also serve as an active site in AIG2-like proteins.
About this Structure
2G0Q is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.
Reference
Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family., Lytle BL, Peterson FC, Tyler EM, Newman CL, Vinarov DA, Markley JL, Volkman BF, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Jun 1;62(Pt, 6):490-3. Epub 2006 May 31. PMID:16754964
Page seeded by OCA on Thu Feb 21 17:27:03 2008
