2ghj
From Proteopedia
(New page: 200px<br /><applet load="2ghj" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ghj, resolution 2.9Å" /> '''Crystal structure of ...) |
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| - | [[Image:2ghj.gif|left|200px]]<br /><applet load="2ghj" size=" | + | [[Image:2ghj.gif|left|200px]]<br /><applet load="2ghj" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="2ghj, resolution 2.9Å" /> | caption="2ghj, resolution 2.9Å" /> | ||
'''Crystal structure of folded and partially unfolded forms of Aquifex aeolicus ribosomal protein L20'''<br /> | '''Crystal structure of folded and partially unfolded forms of Aquifex aeolicus ribosomal protein L20'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The recent finding of intrinsically unstructured proteins defies the | + | The recent finding of intrinsically unstructured proteins defies the classical structure-function paradigm. However, owing to their flexibility, intrinsically unstructured proteins generally escape detailed structural investigations. Consequently little is known about the extent of conformational disorder and its role in biological functions. Here, we present the X-ray structure of the unbound ribosomal protein L20, the long basic amino-terminal extension of which has been previously interpreted as fully disordered in the absence of RNA. This study provides the first detailed picture of two protein folding states trapped together in a crystal and indicates that unfolding occurs in discrete regions of the whole protein, corresponding mainly to RNA-binding residues. The electrostatic destabilization of the long alpha-helix and a structural communication between the two L20 domains are reminiscent of those observed in calmodulin. The detailed comparison of the two conformations observed in the crystal provides new insights into the role of unfolded extensions in ribosomal assembly. |
==About this Structure== | ==About this Structure== | ||
| - | 2GHJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http:// | + | 2GHJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GHJ OCA]. |
==Reference== | ==Reference== | ||
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[[Category: folding intermediate; ribosomal protein extension]] | [[Category: folding intermediate; ribosomal protein extension]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:31:46 2008'' |
Revision as of 15:31, 21 February 2008
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Crystal structure of folded and partially unfolded forms of Aquifex aeolicus ribosomal protein L20
Overview
The recent finding of intrinsically unstructured proteins defies the classical structure-function paradigm. However, owing to their flexibility, intrinsically unstructured proteins generally escape detailed structural investigations. Consequently little is known about the extent of conformational disorder and its role in biological functions. Here, we present the X-ray structure of the unbound ribosomal protein L20, the long basic amino-terminal extension of which has been previously interpreted as fully disordered in the absence of RNA. This study provides the first detailed picture of two protein folding states trapped together in a crystal and indicates that unfolding occurs in discrete regions of the whole protein, corresponding mainly to RNA-binding residues. The electrostatic destabilization of the long alpha-helix and a structural communication between the two L20 domains are reminiscent of those observed in calmodulin. The detailed comparison of the two conformations observed in the crystal provides new insights into the role of unfolded extensions in ribosomal assembly.
About this Structure
2GHJ is a Single protein structure of sequence from Aquifex aeolicus with as ligand. Full crystallographic information is available from OCA.
Reference
Coexistence of two protein folding states in the crystal structure of ribosomal protein L20., Timsit Y, Allemand F, Chiaruttini C, Springer M, EMBO Rep. 2006 Oct;7(10):1013-8. Epub 2006 Sep 15. PMID:16977336
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