Template:STRUCTURE 2fir
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2fir]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2fir]], [[Resolution|resolution]] 2.00Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC: | + | |LIGAND= <scene name='pdbligand=0G7:D-PHENYLALANYL-N-[(3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2-OXOHEXAN-3-YL]-L-PROLINAMIDE'>0G7</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_VIIa Coagulation factor VIIa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.21 3.4.21.21] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_VIIa Coagulation factor VIIa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.21 3.4.21.21] </span> | ||
|GENE= F7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), F3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= F7 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), F3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00211 PTS_IIA_fru], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK11109 PRK11109], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00367 PTS-HPr_like], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00069 GLA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01108 Tissue_fac], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190 Tryp_SPc]</span> | ||
|RELATEDENTRY=[[1dan|1dan]], [[2a2q|2a2q]], [[2aer|2aer]], [[2b8o|2b8o]] | |RELATEDENTRY=[[1dan|1dan]], [[2a2q|2a2q]], [[2aer|2aer]], [[2b8o|2b8o]] | ||
| - | |NONSTDRES= | + | |NONSTDRES=<scene name='pdbligand=CGU:GAMMA-CARBOXY-GLUTAMIC+ACID'>CGU</scene> |
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fir FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fir OCA], [http://www.ebi.ac.uk/pdbsum/2fir PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2fir RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fir FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fir OCA], [http://www.ebi.ac.uk/pdbsum/2fir PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2fir RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firH02 2Firh02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firH01 2Firh01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firT02 2Firt02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firT01 2Firt01]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P08709 P08709], [http://ca.expasy.org/cgi-bin/niceprot.pl?P13726 P13726]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firH02 2Firh02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firH01 2Firh01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firT02 2Firt02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2firT01 2Firt01]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P08709 P08709], [http://ca.expasy.org/cgi-bin/niceprot.pl?P13726 P13726]</span> | ||
| - | | | + | |uPDB=2FIR|CONSURF={{!}}- |
| - | |CONSURF={{!}}- | + | |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Revision as of 13:15, 27 July 2012
| |||||||||
| 2fir, resolution 2.00Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , , , , , , | ||||||||
| Non-Standard Residues: | |||||||||
| Gene: | F7 (Homo sapiens), F3 (Homo sapiens) | ||||||||
| Activity: | Coagulation factor VIIa, with EC number 3.4.21.21 | ||||||||
| Related: | 1dan, 2a2q, 2aer, 2b8o | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
