Sandbox 4

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The protein is associated with Pfam<ref>Finn R, Griffiths-Jones S, Bateman A. (2003). Identifying protein domains with the Pfam database. Curr Protoc Bioinformatics. Chapter 2: Unit 2.5.</ref> entry PF06983 of 3-demethylubiquinone-9 3-methyltransferases.
The protein is associated with Pfam<ref>Finn R, Griffiths-Jones S, Bateman A. (2003). Identifying protein domains with the Pfam database. Curr Protoc Bioinformatics. Chapter 2: Unit 2.5.</ref> entry PF06983 of 3-demethylubiquinone-9 3-methyltransferases.
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<applet load='1tsj' size='400' frame='true' align='right' caption='1tsj, resolution 2.60Å' /> <scene name='1tsj/Evolutionary_consevation_1tsj/1'>highly preserved</scene> and negatively charged.
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<applet load='1tsj' size='400' frame='true' align='right' caption='1tsj, resolution 2.60Å' /> <scene name='1tsj/Evolutionary_consevation_1tsj/1'>highly preserved</scene> and negatively charged.
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<center>{{Template:ColorKey_ConSurf}}</center>
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The potential substrate S-adenosyl-L-methionine has positive formal charge which fits the negative electrostatic potential in the potential catalytic area. The alternative substrate found by the structural homology methylglyoxal is not charged and thus less probable to attach to the potential catalytic area.
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It seems more likely that Q8NX24 belongs to the Glyoxalase/bleomycin resistance protein/dioxygenase superfamily and functions as a demethylubiquinone-9 3-methyltransferase protein.
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==References==
==References==
<references/>
<references/>

Revision as of 16:54, 18 February 2009

The protein is associated with Pfam[1] entry PF06983 of 3-demethylubiquinone-9 3-methyltransferases.

1tsj, resolution 2.60Å

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and negatively charged.

References

  1. ↑ Finn R, Griffiths-Jones S, Bateman A. (2003). Identifying protein domains with the Pfam database. Curr Protoc Bioinformatics. Chapter 2: Unit 2.5.
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