User:Jaime Prilusky/Sandbox BU

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Current revision (11:43, 24 February 2009) (edit) (undo)
 
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<td><applet load='1stp/2' size='200' frame='true' align='right' caption='1stp/2' /></td>
<td><applet load='1stp/2' size='200' frame='true' align='right' caption='1stp/2' /></td>
<td><applet load='1stp/3' size='200' frame='true' align='right' caption='1stp/3' /></td>
<td><applet load='1stp/3' size='200' frame='true' align='right' caption='1stp/3' /></td>
 +
</tr><tr>
 +
<td><applet load='1at9' size='200' frame='true' align='right' caption='1at9' /></td>
 +
<td><applet load='1at9/1' size='200' frame='true' align='right' caption='1at9/1' /></td>
</tr><tr>
</tr><tr>
<td><applet load='1zgc' size='200' frame='true' align='left' caption='1zgc' /></td>
<td><applet load='1zgc' size='200' frame='true' align='left' caption='1zgc' /></td>

Current revision

Testing the Protein Assemblies generated on our server on demand with PISA software.

In order to load and display a structure, the value for the load= parameter determines what it will be shown. For some structures like 1stp, PISA calculates more than one possible Assembly.

  • load='2ace' displays the default PDB structure
  • load='2ace/1' displays the first Assembly calculated by PISA
  • load='2ace/n' displays the n Assembly calculated by PISA


2ace

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2ace/1

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1stp

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1stp/1

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1stp/2

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1stp/3

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1at9

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1at9/1

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1zgc

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1zgc/1

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1y7w

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1y7w/1

Drag the structure with the mouse to rotate


  • Krissinel E, Henrick K. Inference of macromolecular assemblies from crystalline state. J Mol Biol. 2007 Sep 21;372(3):774-97. Epub 2007 May 13. PMID:17681537 doi:10.1016/j.jmb.2007.05.022

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Jaime Prilusky

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