Template:STRUCTURE 3gd8
From Proteopedia
(Difference between revisions)
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3gd8]], | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3gd8]], resolution 1.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Gol+A+1'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gol+A+2'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Gol+A+3'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Gol+A+4'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Gol+A+6'>AC5</scene> and <scene name='pdbsite=AC6:Binding+Site+For+Residue+Bog+A+473'>AC6</scene> | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Gol+A+1'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gol+A+2'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Gol+A+3'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Gol+A+4'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Gol+A+6'>AC5</scene> and <scene name='pdbsite=AC6:Binding+Site+For+Residue+Bog+A+473'>AC6</scene> | ||
|LIGAND= <scene name='pdbligand=BOG:SUGAR+(B-OCTYLGLUCOSIDE)'>BOG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | |LIGAND= <scene name='pdbligand=BOG:SUGAR+(B-OCTYLGLUCOSIDE)'>BOG</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | ||
|GENE= AQP4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | |GENE= AQP4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]) | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gd8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd8 OCA], [http://www.ebi.ac.uk/pdbsum/3gd8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3gd8 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gd8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gd8 OCA], [http://www.ebi.ac.uk/pdbsum/3gd8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3gd8 RCSB]</span> | ||
| - | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query= | + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012269 Ipr012269], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000425 Ipr000425]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00230 PF00230]<br>UniProt : [http://www.uniprot.org/uniprot/P55087 P55087]</span> |
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=AQP4 AQP4]</span> | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=AQP4 AQP4]</span> | ||
| - | |uPDB=3GD8|CONSURF={{!}}- | ||
| - | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| - | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| - | {{!}} '''Toggle Conservation Colors:''' | ||
| - | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| - | Rows = identical sequences: | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>A [x]</text> | ||
| - | <name>jmb_3gd8_A</name> | ||
| - | <title>toggle chain A</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
| - | |||
}} | }} | ||
Revision as of 12:03, 10 June 2009
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| 3gd8, resolution 1.80Å () | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , and | ||||||
| Ligands: | , | ||||||
| Gene: | AQP4 (Homo sapiens) | ||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
