Template:STRUCTURE 2nmz
From Proteopedia
(Difference between revisions)
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{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2nmz]], resolution 0.97Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2nmz]], resolution 0.97Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |LIGAND= <scene name='pdbligand=ROC: | + | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+601'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+602'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+603'>AC3</scene> and <scene name='pdbsite=AC4:Binding+Site+For+Residue+Roc+B+401'>AC4</scene> |
| + | |LIGAND= <scene name='pdbligand=ROC:N~1~-{(1S,2R)-1-BENZYL-3-[(3R,4AR,8AR)-3-(TERT-BUTYLCARBAMOYL)OCTAHYDROISOQUINOLIN-2(1H)-YL]-2-HYDROXYPROPYL}-N~2~-(QUINOLIN-2-YLCARBONYL)-L-ASPARTAMIDE'>ROC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/HIV-1_retropepsin HIV-1 retropepsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.16 3.4.23.16] </span> | ||
|GENE= gag ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 Human immunodeficiency virus 1]) | |GENE= gag ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 Human immunodeficiency virus 1]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00077 RVP]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00077 RVP]</span> | ||
| - | |RELATEDENTRY=[[2nmw|2nmw]], [[2nmy|2nmy]] | + | |RELATEDENTRY=[[2nmw|2nmw]], [[2nmy|2nmy]], [[2nnk|2nnk]], [[2nnp|2nnp]] |
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nmz OCA], [http://www.ebi.ac.uk/pdbsum/2nmz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2nmz RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nmz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nmz OCA], [http://www.ebi.ac.uk/pdbsum/2nmz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2nmz RCSB]</span> | ||
|FUNCTION={{GO|id=GO:0008233 | text = peptidase activity}}{{GO|id=GO:0004190 | text = aspartic-type endopeptidase activity}}{{GO|id=GO:0016787 | text = hydrolase activity}} | |FUNCTION={{GO|id=GO:0008233 | text = peptidase activity}}{{GO|id=GO:0004190 | text = aspartic-type endopeptidase activity}}{{GO|id=GO:0016787 | text = hydrolase activity}} | ||
|PROCESS={{GO|id=GO:0006508 | text = proteolysis}} | |PROCESS={{GO|id=GO:0006508 | text = proteolysis}} | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009007 Ipr009007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001995 Ipr001995], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001969 Ipr001969]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00077 PF00077]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q7SSI0 Q7SSI0]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009007 Ipr009007], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001995 Ipr001995], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001969 Ipr001969]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00077 PF00077]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q7SSI0 Q7SSI0]</span> | ||
| - | |CONSURF={{!}}- | + | |uPDB=2NMZ|CONSURF={{!}}- |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Revision as of 12:44, 21 October 2009
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| 2nmz, resolution 0.97Å () | |||||||||
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| Sites: | , , and | ||||||||
| Ligands: | , | ||||||||
| Gene: | gag (Human immunodeficiency virus 1) | ||||||||
| Activity: | HIV-1 retropepsin, with EC number 3.4.23.16 | ||||||||
| Domains: | RVP | ||||||||
| Related: | 2nmw, 2nmy, 2nnk, 2nnp | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
