Proteopedia:Table of Contents
From Proteopedia
(Difference between revisions)
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*** [[Hydrogen bond]] | *** [[Hydrogen bond]] | ||
*** [[Hydrogen_in_macromolecular_models|Hydrogen in Macromolecular Models]] | *** [[Hydrogen_in_macromolecular_models|Hydrogen in Macromolecular Models]] | ||
| - | ***[[Isoelectric_point]] | + | *** [[Isoelectric_point]] |
* BIOMOLECULES | * BIOMOLECULES | ||
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** NUCLEOTIDES, NUCLEIC ACIDS AND GENETIC INFORMATION | ** NUCLEOTIDES, NUCLEIC ACIDS AND GENETIC INFORMATION | ||
| - | ***DNA | + | *** DNA |
**** [[DNA]] | **** [[DNA]] | ||
| - | ****B-DNA [[1bna]] | + | **** B-DNA [[1bna]] |
**** [[Z-DNA]] | **** [[Z-DNA]] | ||
| - | **AMINO ACIDS | + | ** AMINO ACIDS |
*** [[Amino_Acids]] | *** [[Amino_Acids]] | ||
| - | ***[[Selenocysteine]] | + | *** [[Selenocysteine]] |
** PROTEINS: PRIMARY STRUCTURE | ** PROTEINS: PRIMARY STRUCTURE | ||
** PROTEINS: THREE-DIMENSIONAL STRUCTURE | ** PROTEINS: THREE-DIMENSIONAL STRUCTURE | ||
*** [[S347/The four tiers of protein structure]] | *** [[S347/The four tiers of protein structure]] | ||
| - | ***[[Secondary_structure]] | + | *** [[Secondary_structure]] |
| - | ***Protein structural motifs | + | *** Protein structural motifs |
| - | ****[[User:James_D_Watson/Structural_Templates]] | + | **** [[User:James_D_Watson/Structural_Templates]] |
| - | ***FIBROUS PROTEINS | + | *** FIBROUS PROTEINS |
| - | ****[[Coiled_coil]] | + | **** [[Coiled_coil]] |
**** [[Collagen]] | **** [[Collagen]] | ||
*** Protein Misfolding | *** Protein Misfolding | ||
| - | ****[[Prion_protein]] | + | **** [[Prion_protein]] |
| - | ****[[A_Physical_Model_of_the_Structure_of_GNNQQNY_from_Yeast_Prion_Sup35]] | + | **** [[A_Physical_Model_of_the_Structure_of_GNNQQNY_from_Yeast_Prion_Sup35]] |
** COLORED PROTEINS & THOSE THAT CHANGE COLOR | ** COLORED PROTEINS & THOSE THAT CHANGE COLOR | ||
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**** [[IgA]] | **** [[IgA]] | ||
**** [[Epitopes]] | **** [[Epitopes]] | ||
| - | ****[[Major_Histocompatibility_Complex_Class_I]] | + | **** [[Major_Histocompatibility_Complex_Class_I]] |
*** [[Calmodulin_in_motion]] | *** [[Calmodulin_in_motion]] | ||
| - | ***[[Myoglobin]] | + | *** [[Myoglobin]] |
*** [[Hemoglobin]]; [[Hemoglobin_(Hebrew)]] | *** [[Hemoglobin]]; [[Hemoglobin_(Hebrew)]] | ||
| - | ***[[Kinesin-5]] | + | *** [[Kinesin-5]] |
** LIPIDS AND BIOLOGICAL MEMBRANES | ** LIPIDS AND BIOLOGICAL MEMBRANES | ||
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** MEMBRANE TRANSPORT PROTEINS | ** MEMBRANE TRANSPORT PROTEINS | ||
*** [[A Physical Model of the β2-Adrenergic Receptor]] | *** [[A Physical Model of the β2-Adrenergic Receptor]] | ||
| - | ***[[Lactose_Permease]] | + | *** [[Lactose_Permease]] |
| - | ***[[Proton_Channels]] | + | *** [[Proton_Channels]] |
| - | ***[[Ion_channels]] | + | *** [[Ion_channels]] |
| - | ***[[Mechanosensitive_channels:_opening_and_closing]] | + | *** [[Mechanosensitive_channels:_opening_and_closing]] |
| - | **PRIONS AND INTRINSICALLY DISORDERED PROTEINS | + | ** PRIONS AND INTRINSICALLY DISORDERED PROTEINS |
| - | ***[[Prion_protein]] | + | *** [[Prion_protein]] |
*** [[Doppel]] | *** [[Doppel]] | ||
*** [[Intrinsically Disordered Protein]] | *** [[Intrinsically Disordered Protein]] | ||
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*** [[Insecticidal delta-endotoxin Cyt2Ba from Bacillus thuringiensis]] | *** [[Insecticidal delta-endotoxin Cyt2Ba from Bacillus thuringiensis]] | ||
| - | **MITOSIS, MEOSIS, AND CARGO TRANSPORT PROTEINS | + | ** MITOSIS, MEOSIS, AND CARGO TRANSPORT PROTEINS |
| - | ***[[Kinesin-5]] | + | *** [[Kinesin-5]] |
** VIRUSES | ** VIRUSES | ||
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*** [[Enzyme I of the Phosphoenolpyruvate:Sugar Phosphotransferase System]] | *** [[Enzyme I of the Phosphoenolpyruvate:Sugar Phosphotransferase System]] | ||
*** Serine Hydrolases | *** Serine Hydrolases | ||
| - | ****[[Serine_Protease]] | + | **** [[Serine_Protease]] |
| - | ****[[Trypsin]] | + | **** [[Trypsin]] |
| - | ****[[Alpha-1-antitrypsin]] | + | **** [[Alpha-1-antitrypsin]] |
**** [[Acetylcholinesterase]] (AChE) | **** [[Acetylcholinesterase]] (AChE) | ||
***** [[Acetylcholine]] | ***** [[Acetylcholine]] | ||
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****** [[1eve]] AChE-Aricept complex; [[1eve (Chinese)]]; [[1eve (Russian)]]; [[1eve (Spanish)]]; [[1eve (Turkish)]] | ****** [[1eve]] AChE-Aricept complex; [[1eve (Chinese)]]; [[1eve (Russian)]]; [[1eve (Spanish)]]; [[1eve (Turkish)]] | ||
****** [[AChE_bivalent_inhibitors]] | ****** [[AChE_bivalent_inhibitors]] | ||
| - | ***[[Triose_Phosphate_Isomerase]] | + | *** [[Triose_Phosphate_Isomerase]] |
| - | ***[[Pyruvate_phosphate_dikinase]] | + | *** [[Pyruvate_phosphate_dikinase]] |
| - | ***Cysteine Proteases | + | *** Cysteine Proteases |
| - | ****[[Tobacco_Etch_Virus_(TEV)_Protease]] | + | **** [[Tobacco_Etch_Virus_(TEV)_Protease]] |
| - | ****[[Streptomyces_griseus_Aminopeptidase_(SGAP)]]; [[Aminopeptidase]] | + | **** [[Streptomyces_griseus_Aminopeptidase_(SGAP)]]; [[Aminopeptidase]] |
| - | ***Acid Proteases | + | *** Acid Proteases |
| - | ****[[HIV-1 protease]] | + | **** [[HIV-1 protease]] |
| - | ****[[Pepsin]] | + | **** [[Pepsin]] |
| - | ***Metaloproteases | + | *** Metaloproteases |
| - | ****[[Metalloproteases]] | + | **** [[Metalloproteases]] |
| - | ****[[Matrix_metalloproteinases]] | + | **** [[Matrix_metalloproteinases]] |
| - | ***Oxidoreductases | + | *** Oxidoreductases |
| - | ****[[NADH quinone oxidoreductase ]] | + | **** [[NADH quinone oxidoreductase ]] |
** Enzyme Kinetics, Inhibition, and Control | ** Enzyme Kinetics, Inhibition, and Control | ||
** BIOCHEMICAL SIGNALING | ** BIOCHEMICAL SIGNALING | ||
| - | ***[[Nitric_oxide_synthase]] | + | *** [[Nitric_oxide_synthase]] |
| - | ***[[Recoverin,_a_calcium-activated_myristoyl_switch]] | + | *** [[Recoverin,_a_calcium-activated_myristoyl_switch]] |
| - | ***[[Bcl-2]] | + | *** [[Bcl-2]] |
| - | ***[[C-Myc]] | + | *** [[C-Myc]] |
* METABOLISM | * METABOLISM | ||
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** Glucose Catabolism | ** Glucose Catabolism | ||
| - | ***[[Triose_Phosphate_Isomerase]] | + | *** [[Triose_Phosphate_Isomerase]] |
** Glycogen Metabolism and Gluconeogenesis | ** Glycogen Metabolism and Gluconeogenesis | ||
*** [[Phosphoglucose_isomerase]] | *** [[Phosphoglucose_isomerase]] | ||
*** [[Calmodulin_in_motion]] | *** [[Calmodulin_in_motion]] | ||
| - | ***[[Biotin_Protein_Ligase]] | + | *** [[Biotin_Protein_Ligase]] |
** Citric Acid Cycle | ** Citric Acid Cycle | ||
| - | ***[[Aconitase]] | + | *** [[Aconitase]] |
** Electron Transport and Oxidative Phosphorylation | ** Electron Transport and Oxidative Phosphorylation | ||
| - | ***[[NADH quinone oxidoreductase ]] | + | *** [[NADH quinone oxidoreductase ]] |
** Photosynthesis | ** Photosynthesis | ||
| - | ***[[Photosystem_II]] | + | *** [[Photosystem_II]] |
| - | ***[[Ribulose-1,5-bisphosphate_carboxylase/oxygenase]] | + | *** [[Ribulose-1,5-bisphosphate_carboxylase/oxygenase]] |
| - | ***[[PrrA_in_Rhodobacter_sphaeroides]] | + | *** [[PrrA_in_Rhodobacter_sphaeroides]] |
| - | ***[[Pyruvate_phosphate_dikinase]] | + | *** [[Pyruvate_phosphate_dikinase]] |
** Lipid Metabolism | ** Lipid Metabolism | ||
| - | ***[[Acid-beta-glucosidase]] | + | *** [[Acid-beta-glucosidase]] |
** Amino Acid Metabolism | ** Amino Acid Metabolism | ||
| - | ***[[Aromatic_amino_acid_hydroxylases]] | + | *** [[Aromatic_amino_acid_hydroxylases]] |
| - | ***[[Phenylalanine_hydroxylase]] | + | *** [[Phenylalanine_hydroxylase]] |
| - | ***[[Tyrosine_hydroxylase]] | + | *** [[Tyrosine_hydroxylase]] |
| - | ***[[ATP_Phosphoribosyl_Transferase]] | + | *** [[ATP_Phosphoribosyl_Transferase]] |
| - | ***[[Isochorismate_pyruvate_lyase]] | + | *** [[Isochorismate_pyruvate_lyase]] |
** Mammalian Fuel Metabolism: Integration and Regulation | ** Mammalian Fuel Metabolism: Integration and Regulation | ||
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** Nucleic Acid Structure | ** Nucleic Acid Structure | ||
| - | ***[[Z-DNA]] | + | *** [[Z-DNA]] |
| - | ***[[Nucleosomes]] | + | *** [[Nucleosomes]] |
** DNA Replication, Repair, and Recombination | ** DNA Replication, Repair, and Recombination | ||
*** [[DNA Replication,Transcription and Translation]] | *** [[DNA Replication,Transcription and Translation]] | ||
| - | *** | + | *** [[PcrA_helicase]] |
*** [[Fpg_Nei_Protein_Superfamily]] - DNA Repair and Base Excision DNA Repair | *** [[Fpg_Nei_Protein_Superfamily]] - DNA Repair and Base Excision DNA Repair | ||
*** [[Human RecQ-Like protein 1]] - RecQ family of DNA helicases are conserved in from bacteria to man | *** [[Human RecQ-Like protein 1]] - RecQ family of DNA helicases are conserved in from bacteria to man | ||
| - | ***[[Structure_of_E._coli_DnaC_helicase_loader]] | + | *** [[Structure_of_E._coli_DnaC_helicase_loader]] |
| - | ***[[Rop_protein]] | + | *** [[Rop_protein]] |
** Transcription and RNA Processing | ** Transcription and RNA Processing | ||
| - | ***[[C-Myc]] | + | *** [[C-Myc]] |
| - | ***[[Lac_repressor]] | + | *** [[Lac_repressor]] |
| - | ***[[TATA-Binding_Protein]] | + | *** [[TATA-Binding_Protein]] |
| - | ***[[RSP1275]] | + | *** [[RSP1275]] |
| - | ***[[Transcription_Termination_Factor_Rho]] | + | *** [[Transcription_Termination_Factor_Rho]] |
** Protein Synthesis | ** Protein Synthesis | ||
| - | ***[[Ribosome]] | + | *** [[Ribosome]] |
| - | ***[[SelB_Recognition]] | + | *** [[SelB_Recognition]] |
** Regulation of Gene Expression | ** Regulation of Gene Expression | ||
| - | ***[[Lac_repressor]] | + | *** [[Lac_repressor]] |
| - | ***[[Irr]] | + | *** [[Irr]] |
| - | ***[[Tangible_Models_of_Cdc42_Interacting_With_Intersectin]] | + | *** [[Tangible_Models_of_Cdc42_Interacting_With_Intersectin]] |
* EVOLUTION | * EVOLUTION | ||
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* IMMUNE SYSTEM | * IMMUNE SYSTEM | ||
| - | **[[Major_Histocompatibility_Complex_Class_I]] | + | ** [[Major_Histocompatibility_Complex_Class_I]] |
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* METHODS OF STRUCTURE DETERMINATION | * METHODS OF STRUCTURE DETERMINATION | ||
** X-ray | ** X-ray | ||
| - | ***[[X-ray_crystallography]] | + | *** [[X-ray_crystallography]] |
| - | ****[[Asymmetric_Unit]] | + | **** [[Asymmetric_Unit]] |
| - | ****[[Biological_Unit]] | + | **** [[Biological_Unit]] |
| - | ****[[Electron_density_maps]] | + | **** [[Electron_density_maps]] |
| - | ***SAXS | + | *** SAXS |
| - | ** NMR | + | ** NMR |
| - | ***[[NMR_Ensembles_of_Models]] | + | *** [[NMR_Ensembles_of_Models]] |
** Electron Microscopy | ** Electron Microscopy | ||
Revision as of 15:41, 11 November 2009
Proteopedia Page Contributors and Editors (what is this?)
Joel L. Sussman, Eran Hodis, Wayne Decatur, Alexander Berchansky, Judy Voet, Alejandro Porto, Helen Ginn, David Canner, Israel Hanukoglu, Karen L. Lee, Arthur Cox, Yuan-Ping Pang, Tilman Schirmer, Eric Martz, Tomas Klumpler, Karl Oberholser, Angel Herraez, Jaime Prilusky
