Template:STRUCTURE 2ia6
From Proteopedia
(Difference between revisions)
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ia6]], | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2ia6]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=1:1'>1</scene>, <scene name='pdbsite=AC1:Binding+Site+For+Residue+Edo+C+605'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+A+1919'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Edo+C+606'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Po4+A+1920'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Edo+C+607'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Bap+D+2906'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Gol+E+601'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Bap+F+2906'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+F+602'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Gol+F+604'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Ca+A+403'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Ca+A+404'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Atp+A+401'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Ca+B+502'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Ca+B+503'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Ca+B+504'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Atp+B+501'>BC8</scene> and <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+B+603'>BC9</scene> | |SITE= <scene name='pdbsite=1:1'>1</scene>, <scene name='pdbsite=AC1:Binding+Site+For+Residue+Edo+C+605'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Po4+A+1919'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Edo+C+606'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Po4+A+1920'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Edo+C+607'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Bap+D+2906'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Gol+E+601'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Bap+F+2906'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+F+602'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Gol+F+604'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Ca+A+403'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Ca+A+404'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Atp+A+401'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Ca+B+502'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Ca+B+503'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Ca+B+504'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Atp+B+501'>BC8</scene> and <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+B+603'>BC9</scene> | ||
|LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | |LIGAND= <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span> | ||
| - | |GENE= dbh, dpo4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id= | + | |GENE= dbh, dpo4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus]) |
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03586 Pol_IV_kappa]</span> | ||
|RELATEDENTRY=[[2ibk|2ibk]] | |RELATEDENTRY=[[2ibk|2ibk]] | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia6 OCA], [http://www.ebi.ac.uk/pdbsum/2ia6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ia6 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ia6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ia6 OCA], [http://www.ebi.ac.uk/pdbsum/2ia6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ia6 RCSB]</span> | ||
| - | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/2ia6A04 2Ia6A04], [http://www.cathdb.info/domain/2ia6A03 2Ia6A03], [http://www.cathdb.info/domain/2ia6A01 2Ia6A01], [http://www.cathdb.info/domain/2ia6B04 2Ia6B04], [http://www.cathdb.info/domain/2ia6B03 2Ia6B03], [http://www.cathdb.info/domain/2ia6B01 2Ia6B01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017963 Ipr017963], [http://www.ebi.ac.uk/interpro/ISearch?query= | + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/2ia6A04 2Ia6A04], [http://www.cathdb.info/domain/2ia6A03 2Ia6A03], [http://www.cathdb.info/domain/2ia6A01 2Ia6A01], [http://www.cathdb.info/domain/2ia6B04 2Ia6B04], [http://www.cathdb.info/domain/2ia6B03 2Ia6B03], [http://www.cathdb.info/domain/2ia6B01 2Ia6B01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017963 Ipr017963], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001126 Ipr001126], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017961 Ipr017961], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017962 Ipr017962]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF11799 PF11799], [http://pfam.sanger.ac.uk/family?acc=PF11798 PF11798], [http://pfam.sanger.ac.uk/family?acc=PF00817 PF00817]<br>UniProt : [http://www.uniprot.org/uniprot/Q97W02 Q97W02]</span> |
|uPDB=2IA6|CONSURF={{!}}- | |uPDB=2IA6|CONSURF={{!}}- | ||
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
Revision as of 07:05, 23 December 2009
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| 2ia6, resolution 2.50Å () | |||||||||
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| Sites: | , , , , , , , , , , , , , , , , , and | ||||||||
| Ligands: | , , , , , | ||||||||
| Gene: | dbh, dpo4 (Sulfolobus solfataricus) | ||||||||
| Activity: | DNA-directed DNA polymerase, with EC number 2.7.7.7 | ||||||||
| Domains: | Pol_IV_kappa | ||||||||
| Related: | 2ibk | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
