Template:STRUCTURE 1cdw

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(Difference between revisions)

Revision as of 06:51, 21 January 2010

Structural annotation:
Resources:	CATH : 1Cdwa02, 1Cdwa01 InterPro : Ipr012295, Ipr012294, Ipr000814 Pfam : PF00352 SCOP : d1cdwa1, d1cdwa2 UniProt : P20226

Functional annotation:
Resources:	GeneCard : TBP
Cellular component:	nucleus transcription factor TFIID complex
Biological process:	transcription initiation from RNA polymerase II promoter transcription cell death transcription from RNA polymerase II promoter regulation of transcription, DNA-dependent
Molecular function:	general RNA polymerase II transcription factor activity binding DNA binding protein binding RNA polymerase II transcription factor activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1cdw"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cdw]], resolution 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1cdw]], [[Resolution|resolution]] 1.90&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04516 TBP_eukaryotes], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2101 SPT15]</span>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cdw OCA], [http://www.ebi.ac.uk/pdbsum/1cdw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cdw RCSB]</span>
 |FUNCTION={{GO|id=GO:0016251 | text = general RNA polymerase II transcription factor activity}}{{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0003702 | text = RNA polymerase II transcription factor activity}}
@@ Line 8: / Line 7: @@
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA02 1Cdwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1cdwA01 1Cdwa01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012295 Ipr012295], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012294 Ipr012294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000814 Ipr000814]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00352 PF00352]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41212 d1cdwa1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=41213 d1cdwa2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P20226 P20226]</span>
 |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TBP TBP]</span>
-|CONSURF={{!}}-
+|uPDB=1CDW|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Template:STRUCTURE 1cdw

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Revision as of 06:51, 21 January 2010

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