Template:STRUCTURE 1rcx

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Revision as of 07:03, 21 January 2010

1rcx, resolution 2.40Å ()

Sites:

, , , , , , , , , , , , , , and

Ligands:

Activity:

Ribulose-bisphosphate carboxylase, with EC number 4.1.1.39

Structural annotation:

Resources:

CATH : 1Rcxb02, 1Rcxb01, 1Rcxc00, 1Rcxe01, 1Rcxe02, 1Rcxf00, 1Rcxh02, 1Rcxh01, 1Rcxi00, 1Rcxk02, 1Rcxk01, 1Rcxl01, 1Rcxl02, 1Rcxm00, 1Rcxo02, 1Rcxo01, 1Rcxp00, 1Rcxr02, 1Rcxr01, 1Rcxs00, 1Rcxt00, 1Rcxv01, 1Rcxv02, 1Rcxw00
InterPro : Ipr000685, Ipr000894
Pfam : PF00016, PF02788, PF00101
SCOP : d1rcxb2, d1rcxb1, d1rcxc_, d1rcxe2, d1rcxe1, d1rcxf_, d1rcxh2, d1rcxh1, d1rcxi_, d1rcxk2, d1rcxk1, d1rcxl2, d1rcxl1, d1rcxm_, d1rcxo2, d1rcxo1, d1rcxp_, d1rcxr1, d1rcxr2, d1rcxs_, d1rcxt_, d1rcxv2, d1rcxv1, d1rcxw_
UniProt : P00875, P00870

Functional annotation:
Cellular component:	chloroplast chloroplast ribulose bisphosphate carboxylase complex
Biological process:	carbon utilization by fixation of carbon dioxide photosynthesis photorespiration reductive pentose-phosphate cycle
Molecular function:	lyase activity magnesium ion binding metal ion binding ribulose-bisphosphate carboxylase activity monooxygenase activity oxidoreductase activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

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OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1rcx"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1rcx]], resolution 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1rcx]], [[Resolution|resolution]] 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|SITE= <scene name='pdbsite=ACB:Active+Site'>ACB</scene>, <scene name='pdbsite=ACE:Active+Site'>ACE</scene>, <scene name='pdbsite=ACH:Active+Site'>ACH</scene>, <scene name='pdbsite=ACK:Active+Site'>ACK</scene>, <scene name='pdbsite=ACL:Active+Site'>ACL</scene>, <scene name='pdbsite=ACO:Active+Site'>ACO</scene>, <scene name='pdbsite=ACR:Active+Site'>ACR</scene> and <scene name='pdbsite=ACV:Active+Site'>ACV</scene>
+|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Rub+L+476'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Rub+B+476'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Rub+E+476'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Rub+H+476'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Rub+K+476'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Rub+O+476'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Rub+R+476'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Rub+V+476'>AC8</scene>, <scene name='pdbsite=ACB:Active+Site'>ACB</scene>, <scene name='pdbsite=ACE:Active+Site'>ACE</scene>, <scene name='pdbsite=ACH:Active+Site'>ACH</scene>, <scene name='pdbsite=ACK:Active+Site'>ACK</scene>, <scene name='pdbsite=ACL:Active+Site'>ACL</scene>, <scene name='pdbsite=ACO:Active+Site'>ACO</scene>, <scene name='pdbsite=ACR:Active+Site'>ACR</scene> and <scene name='pdbsite=ACV:Active+Site'>ACV</scene>
 |LIGAND= <scene name='pdbligand=RUB:SUGAR+(RIBULOSE-1,5-DIPHOSPHATE)'>RUB</scene>
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=CHL00040 rbcL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00016 RuBisCO_large], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02788 RuBisCO_large_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03527 RuBisCO_small]</span>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rcx OCA], [http://www.ebi.ac.uk/pdbsum/1rcx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rcx RCSB]</span>
 |FUNCTION={{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016984 | text = ribulose-bisphosphate carboxylase activity}}{{GO|id=GO:0004497 | text = monooxygenase activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}
@@ Line 10: / Line 9: @@
 |COMPONENT={{GO|id=GO:0009507 | text = chloroplast}}{{GO|id=GO:0009573 | text = chloroplast ribulose bisphosphate carboxylase complex}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxB02 1Rcxb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxB01 1Rcxb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxC00 1Rcxc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxE01 1Rcxe01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxE02 1Rcxe02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxF00 1Rcxf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxH02 1Rcxh02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxH01 1Rcxh01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxI00 1Rcxi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxK02 1Rcxk02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxK01 1Rcxk01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxL01 1Rcxl01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxL02 1Rcxl02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxM00 1Rcxm00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxO02 1Rcxo02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxO01 1Rcxo01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxP00 1Rcxp00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxR02 1Rcxr02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxR01 1Rcxr01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxS00 1Rcxs00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxT00 1Rcxt00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxV01 1Rcxv01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxV02 1Rcxv02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxW00 1Rcxw00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000685 Ipr000685], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000894 Ipr000894]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00016 PF00016], [http://pfam.sanger.ac.uk/family?acc=PF02788 PF02788], [http://pfam.sanger.ac.uk/family?acc=PF00101 PF00101]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39271 d1rcxb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29365 d1rcxb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39655 d1rcxc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39272 d1rcxe2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29366 d1rcxe1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39656 d1rcxf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39273 d1rcxh2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29367 d1rcxh1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39657 d1rcxi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39274 d1rcxk2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29368 d1rcxk1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39270 d1rcxl2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29364 d1rcxl1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39658 d1rcxm_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39275 d1rcxo2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29369 d1rcxo1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39659 d1rcxp_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29370 d1rcxr1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39276 d1rcxr2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39654 d1rcxs_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39660 d1rcxt_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39277 d1rcxv2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29371 d1rcxv1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39661 d1rcxw_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00875 P00875], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00870 P00870]</span>
-|CONSURF={{!}}-
+|uPDB=1RCX|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Template:STRUCTURE 1rcx

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Revision as of 07:03, 21 January 2010

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