Sandbox 135

== Yurie T. Kim's T7 Polymerase Scene==

== Figure 1 ==

Figure 1 structure shows T7 polymerase with simplification to show Residue R632 and Y639 binding nucleotide chains.

<applet load='1msw' size='600' frame='true' align='center' scene='Sandbox_135/1msw_simplified/1' caption='1MSW' />

<scene name='Sandbox_135/1msw_simplified/1'>Binding of R632 and Y639</scene>

== Figure 2 ==

Figure 2 structures shows T7 polymerase. Specifically those show intensified residue from 28 to 60.

For "Original" structure intensified residues are brown where as for "New" structure intensified residues are green. "Original" structure and "new" structure are from two different experiments. "New" structure show initiation of polymerization. "Original" structure show transition from initiation to elongation.

<applet load='1msw' size='600' frame='true' align='center' scene='Sandbox_135/1msw/1' caption='original' />

<scene name='Sandbox_135/1msw/1'>Residue 28-60</scene>

<applet load='1qln' size='600' frame='true' align='center' scene='Sandbox_135/1qln/1' caption='New' />

<scene name='Sandbox_135/1qln/1'>Residue 28-60</scene>