This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 3iax
From Proteopedia
(Difference between revisions)
m (Protected "Template:STRUCTURE 3iax" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3iax]], resolution 2.60Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3iax]], [[Resolution|resolution]] 2.60Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Na+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Ca+A+501'>AC2</scene> and <scene name='pdbsite=AC3:Binding+Site+For+Residue+Gol+A+502'>AC3</scene> | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Na+A+500'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Ca+A+501'>AC2</scene> and <scene name='pdbsite=AC3:Binding+Site+For+Residue+Gol+A+502'>AC3</scene> | ||
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | ||
|GENE= b0740, JW5100, tolB, UTI89_C0736 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), caa, colA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=546 Citrobacter freundii]) | |GENE= b0740, JW5100, tolB, UTI89_C0736 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), caa, colA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=546 Citrobacter freundii]) | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iax OCA], [http://www.ebi.ac.uk/pdbsum/3iax PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3iax RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iax FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iax OCA], [http://www.ebi.ac.uk/pdbsum/3iax PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3iax RCSB]</span> | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011042 Ipr011042], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011044 Ipr011044], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR007195 Ipr007195], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014167 Ipr014167], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011659 Ipr011659], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000293 Ipr000293]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF04052 PF04052], [http://pfam.sanger.ac.uk/family?acc=PF07676 PF07676]</span> | ||
| + | |uPDB=3IAX|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_3iax_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_3iax_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 13:03, 28 January 2010
| |||||||||
| 3iax, resolution 2.60Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | , and | ||||||||
| Ligands: | , , | ||||||||
| Gene: | b0740, JW5100, tolB, UTI89_C0736 (Escherichia coli), caa, colA (Citrobacter freundii) | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

