This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Proteopedia:Table of Contents
From Proteopedia
| Line 154: | Line 154: | ||
** [[Coiled coil]] | ** [[Coiled coil]] | ||
** [[Collagen]] | ** [[Collagen]] | ||
| + | |||
| + | * Small Iron Sulfur Proteins | ||
| + | ** Ferredoxins (Fd) | ||
| + | |||
| + | ***2Fe-2S containing ferredoxins | ||
| + | |||
| + | |||
| + | |||
| + | |||
| + | |||
| + | ****[[3hui]] – Fd – ''Rhodopseudomonas palustris'' | ||
| + | ****[[2kaj]], [[1dox]], [[1doy]] – SyFd +Ga – Synechocystis – NMR | ||
| + | ****[[1off]] – SyFd | ||
| + | ****[[3gce]] – Fd – Nocardioides aromaticivorans | ||
| + | ****[[2e4p]], [[2e4q]] - Fd – ''Pseudomonas sp.'' | ||
| + | ****[[2q3w]], [[1vm9]] - PmFd (mutant) – ''Pseudomonas mendocina'' | ||
| + | ****[[2i7f]] - Fd – ''Rhodobacter capsulatus'' | ||
| + | ****[[1rfk]] - Fd – Cyanobacterium ''masticogladus laminosus'' | ||
| + | ****[[1vck]] - Fd – ''Pseudomonas resinovorans'' | ||
| + | ****[[1wri]], [[1frr]] - Fd – Equisetum arvense | ||
| + | ****[[1sjg]] - PmFd– NMR | ||
| + | ****[[1iue]] - Fd– Plasmodium falciparum | ||
| + | ****[[1m2a]] –AeFd – Aquifex aeolicus | ||
| + | ****[[1m2b]], [[1m2d]], [[1f37]], [[1f5b]], [[1f5c]] – AeFd (mutant) | ||
| + | ****[[1l5p]] – Fd – Trichomonas vaginalis | ||
| + | ****[[1i7h]] - Fd – Escherichia coli | ||
| + | ****[[1czp]], [[1qt9]], [[1frd]], [[1fxa]] - aFd– anabaena | ||
| + | ****[[1j7a]], [[1j7b]], [[1j7c]] , [[1qoa]], [[1qob]], [[1qof]], [[1qog]]- aFd (mutant) | ||
| + | ****[[1e0z]] – Fd – Halobacterium salinarium | ||
| + | ****[[1pfd]] – Fd – Petroselinum crispum – NMR | ||
| + | ****[[1a70]] - Fd (mutant) – Spinacia oleracea | ||
| + | ****[[1awd]] - Fd – Chlorella fusca | ||
| + | ****[[2cjn]], [[2cjo]], [[1roe]] – SyFd – NMR | ||
| + | ****[[1rof]] – SyFd – Synechococcus elongates | ||
| + | ****[[1doi]] - Fd – Haloarcula marismortui | ||
| + | ****[[4fxc]] – Fd – Spirulina platensis | ||
| + | ****[[1fxi]] – Fd – Aphanothece sacrum | ||
| + | ****[[3dqy]], [[2qpz]] - Fd – Pseudomonas putida | ||
| + | |||
| + | ** 4Fe-4S containing ferredoxins | ||
| + | |||
| + | ****[[3eun]] – AvFd – Allochromatium vinosum | ||
| + | ****[[3exy]] - AvFd (mutant) | ||
| + | ****[[2vkr]] - Fd+Zn – Acidianus ambivalens | ||
| + | ****[[2z8q]] - PfFd (mutant) – Pyrococcus furiosus | ||
| + | ****[[2fgo]] - Fd– Pseudomonas aeruginosa | ||
| + | ****[[1iqz]], [[1ir0]] - BtFd – Bacillus thermoproteolyticus | ||
| + | ****[[1rgv]] - Fd – Thauera aromatica | ||
| + | ****[[1dax]], [[1dfd]] – DaFd – Desulfovibrio africanus – NMR | ||
| + | ****[[1fxr]] - DaFd | ||
| + | ****[[1vjw]] – Fd – Thermotoga maritima | ||
| + | |||
| + | ** 3Fe-4S containing ferredoxins | ||
| + | |||
| + | ****[[2v2k]] – Fd – Mycobacterium smegmatis | ||
| + | ****[[1wtf]] - BtFd (mutant) | ||
| + | ****[[1sj1]] - PfFd | ||
| + | ****[[1fxd]] - DgFd – Desulfovibrio gigas | ||
| + | ****[[1f2g]] – DgFd – NMR | ||
| + | ****[[1xer]] - Fd – Sulfolobus tokodaii | ||
| + | |||
| + | ** 4Fe-4S+3Fe-4S containing ferredoxins | ||
| + | |||
| + | ****[[1gao]], [[6fdr]], [[7fd1]], [[7fdr]], [[1axq]], [[6fd1]], [[1frh]], ****[[1fri]],[[1frj]], [[1frk]], [[1frl]], [[1frm]], [[1fda]], [[1fdb]], ****[[1fdd]], [[5fd1]], [[1fer]] – AvFd – Azotobacter vinelandii | ||
| + | ****[[1pc4]], [[1pc5]], [[1g6b]], [[1g3o]], [[1ff2]], [[1b0v]], [[1d3w]], ****[[1b0t]], [[1a6l]], [[1ftc]], [[1frx]], [[2fd2]], [[1fd2]] - AvFd (mutant) | ||
| + | ****[[1h98]] – Fd – Thermus thermophilus | ||
| + | ****[[1a8p]], [[1bd6]] - BsFd – Bacillus schlegelii – NMR | ||
| + | |||
| + | ** 4Fe-4S+4Fe-4S containing ferredoxins | ||
| + | |||
| + | ****[[1dur]] – Fd – Peptoniphilus asaccarolyticus | ||
| + | ****[[1bwe]], [[1bqx]] - BsFd (mutant) – NMR | ||
| + | ****[[2fdn]], [[1fca]] , [[1fdn]]- Fd – Clostridium acidi-urici | ||
| + | ****[[1blu]] - Fd – Chromatium vinosum | ||
| + | ****[[1clf ]]– Fd – Clostridium pasteurianum – NMR | ||
| + | |||
| + | ** Adrenoredoxin | ||
| + | |||
| + | ****[[2jqr]] – ADR Fd domain (mutant)+cytochrome c (mutant) – yeast – NMR | ||
| + | ****[[2bt6]] – cADR1 modified – cow | ||
| + | ****[[1l6u]], [[1l6v]] – cADR1 – NMR | ||
| + | ****[[1e6e]] – cADR (mutant)+ADR reductase | ||
| + | ****[[1cje]], [[1ayf]] - cADR | ||
| + | |||
| + | ** Putidaredoxin | ||
| + | |||
| + | ****[[1yji]], [[1yjj]], [[1pdx]] – PpPUT – Pseudomonas putida – NMR | ||
| + | ****[[3lb8]] – PpPUT (mutant)+PUT reductase | ||
| + | ****[[1xln]], [[1xlo]], [[1xlp]], [[1xlq]], [[1r7s]], [[1oqq]], [[1oqr]] - PpPUT (mutant) | ||
| + | ****[[1gpx]], [[1put]]- PpPUT (mutant) - NMR | ||
| + | |||
| + | ** Terpredoxin | ||
| + | |||
| + | ****[[1b9r]] – TER – Pseudomonas - NMR | ||
| + | |||
* Metabolism | * Metabolism | ||
Revision as of 04:55, 28 May 2010
This guide to the contents of Proteopedia is maintained manually (not automatically generated) and so is inevitably incomplete. Please be sure to use the search slots at the left if you don't find what you are looking for below.
Proteopedia Page Contributors and Editors (what is this?)
Joel L. Sussman, Eran Hodis, Wayne Decatur, Alexander Berchansky, Judy Voet, Alejandro Porto, Helen Ginn, David Canner, Israel Hanukoglu, Karen L. Lee, Arthur Cox, Yuan-Ping Pang, Tilman Schirmer, Eric Martz, Tomas Klumpler, Karl Oberholser, Angel Herraez, Jaime Prilusky
