Fibrinogen

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<applet load='3hus2.pdb' size='300' frame='true' align='right' scene="Fibrinogen/Fibrinogen_starting_scene/2" caption= 'Crystal structure of fibrinogen fragment D with the peptide ligand Gly-Pro-Arg-Pro-amide, [[3hus]]' />
<applet load='3hus2.pdb' size='300' frame='true' align='right' scene="Fibrinogen/Fibrinogen_starting_scene/2" caption= 'Crystal structure of fibrinogen fragment D with the peptide ligand Gly-Pro-Arg-Pro-amide, [[3hus]]' />
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'''Fibrinogen''' is a glycoprotein found in the blood that is converted into fibrin during blood coagulation. Fibrinogen is cleaved by another protein, [[thrombin]], exposing Knobs A & B to form fibrin. It is this fibrin that is linked to clotting factors like factor XIII which form clots to prevent excessive bleeding from wounds sustained.
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'''3D Structure of Fibrinogen''' <br />
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The image at the left is a Crystal Structure of a Fibrinogen Fragment with the peptide ligand Gly-Pro-Arg-Pro-amide ([[3hus]])
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==Fibrinogen==
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==3D Structure of Fibrinogen==
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Fibrinogen is composed of 3 non-identical chains alpha, beta, gamma (Fba, Fbb, Fbg) . Fibrinogen is cleaved by thrombin which exposes Knobs A & B to form fibrin - the blood clotting protein.
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Fibrinogen is composed of 3 non-identical chains alpha, beta, gamma (Fba, Fbb, Fbg) .
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==3D Structure of Fibrinogen==
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===Fibrinogen alpha+beta+gamma chains===
===Fibrinogen alpha+beta+gamma chains===

Revision as of 05:40, 26 July 2010

Image:3hus2.jpg
Crystal Structure of Fibrinogen with peptide ligand, 3hus

Crystal structure of fibrinogen fragment D with the peptide ligand Gly-Pro-Arg-Pro-amide, 3hus

Drag the structure with the mouse to rotate

Fibrinogen is a glycoprotein found in the blood that is converted into fibrin during blood coagulation. Fibrinogen is cleaved by another protein, thrombin, exposing Knobs A & B to form fibrin. It is this fibrin that is linked to clotting factors like factor XIII which form clots to prevent excessive bleeding from wounds sustained.

Contents

3D Structure of Fibrinogen

Fibrinogen is composed of 3 non-identical chains alpha, beta, gamma (Fba, Fbb, Fbg) .

Fibrinogen alpha+beta+gamma chains

3hus, 3h32, 3e1i, 3bvh, 2hlo, 2hod, 2hpc, 2oyh, 2oyi, 2h43, 2ffd, 1re3, 1rf1, 1n86, 1ltj – hFba+hFbb+hFbg+peptide ligand – human
3ghg, 2q9i, 2z4e - hFba+hFbb+hFbg+knob A & B
2a45 - hFba+hFbb+hFbg+thrombin+PPACK thrombin inhibitor
1re4, 1rf0, 1n8e, 1lt9 - hFba+hFbb+hFbg
1jy3, 1deq – cFba+cFbb+cFbg - cow
1n73, 1lwu - Fba+Fbb+Fbg+peptide ligand – Sea lamprey
1m1j - heFba+heFbb+heFbg+peptide ligand – hen
1ei3 - heFba+heFbb+heFbg

Fibrinogen alpha chain

1fzd – hFba EC domain
2jor – cFba – NMR
2baf – cFba

Fibrinogen beta chain

1fzf, 1fzg – hFb fragment double-D +peptide ligand
1fze, 1fza, 1fzb – hFb fragment D

Fibrinogen gamma chain

2vr3 – hFbg+SaClumping Factor A – Staphylococcus aureus
2vdo, 2vdp, 2vdq, 2vdr – hFbg+Integrin alpha IIB+Integrin beta-3+Monoclonal antibody heavy and light chains
2fib, 3fib - hFbg+peptide ligand
1fib – hFbg+Ca
1fic, 1fid - hFbg

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, David Canner, Mark Hoelzer, Alexander Berchansky, Angel Herraez

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