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User:David Canner/Sandbox good

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====Tip #4: Providing a wide view scene of an area of interest before zooming in provides context====
====Tip #4: Providing a wide view scene of an area of interest before zooming in provides context====
=====Example from the page [[The Structure of PI3K]]=====
=====Example from the page [[The Structure of PI3K]]=====
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<center><scene name='Phosphoinositide_3-Kinases/Nsh2__and_helical_ligand_out/2'>Initial Scene (Reset)</scene></center>
+
<center><scene name='User:David_Canner/Sandbox_P/Nsh2__and_helical_ligand_out/1'>Initial Scene (Reset)</scene></center>
This loop in <scene name='User:David_Canner/Sandbox_P/Nsh2__and_helical_ligand_out/2'>the helical domain </scene> which contains the hotspots (residues 542-546) is located precisely where <scene name='User:David_Canner/Sandbox_P/Nsh2_ligand_just_ligand_full/1'> the phosphopeptide of NSH2 ligands, like PDGFR, bind to NSH2.</scene> The salt bridge formed between <scene name='User:David_Canner/Sandbox_P/Nsh2_disruption_of_salt/1'>Glu 542 and nSH2 is disrupted upon binding phosphorylated peptides</scene> like PDGFR, eliminating nSH2-mediated inhibition of p110α and activating the enzyme to phosphorylate PIP2 into PIP3.
This loop in <scene name='User:David_Canner/Sandbox_P/Nsh2__and_helical_ligand_out/2'>the helical domain </scene> which contains the hotspots (residues 542-546) is located precisely where <scene name='User:David_Canner/Sandbox_P/Nsh2_ligand_just_ligand_full/1'> the phosphopeptide of NSH2 ligands, like PDGFR, bind to NSH2.</scene> The salt bridge formed between <scene name='User:David_Canner/Sandbox_P/Nsh2_disruption_of_salt/1'>Glu 542 and nSH2 is disrupted upon binding phosphorylated peptides</scene> like PDGFR, eliminating nSH2-mediated inhibition of p110α and activating the enzyme to phosphorylate PIP2 into PIP3.

Revision as of 09:40, 21 November 2010

How to Make Excellent Scenes

This is a list of tips and tricks to develop effective scenes for your pages. The scenes below were taken from other pages with effective scenes.

Scene Transitions

PDB ID 1dq8

Drag the structure with the mouse to rotate


Proteopedia Page Contributors and Editors (what is this?)

David Canner

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