Ribosomal protein L15
From Proteopedia
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===L15 in 50S subunit+RNA=== | ===L15 in 50S subunit+RNA=== | ||
| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy – TtRPL15 in 50S subunit+RNA fragments | + | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL15 in 50S subunit+RNA fragments -'' Thermus thermophilus''<br /> |
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA | + | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA<br /> |
[[3fin]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | [[3fin]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | ||
| - | [[2wwq – EcRPL15 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli | + | [[2wwq]] – EcRPL15 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> |
| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA | + | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA<br /> |
[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | ||
| - | [[3kcr]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase | + | [[3kcr]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br /> |
| - | [[3bbo]] - RPL15 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach | + | [[3bbo]] - RPL15 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> |
| - | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans | + | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> |
| - | [[1kqs]], [[1qvg]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA | + | [[1kqs]], [[1qvg]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> |
| - | [[1jj2]], [[1ffk]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA | + | [[1jj2]], [[1ffk]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA<br /> |
| - | [[1q86]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin | + | [[1q86]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin<br /> |
| - | [[1qvf]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix | + | [[1qvf]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix<br /> |
| - | [[3iy9 – RPL15 in 50S subunit – Leishmania taretolae | + | [[3iy9]] – RPL15 in 50S subunit – ''Leishmania taretolae'' |
===L15 in 50S subunit + antibiotics=== | ===L15 in 50S subunit + antibiotics=== | ||
| - | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic | + | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> |
| - | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic | + | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> |
| - | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic | + | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br /> |
| - | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[1q7y]], [[1q81]], [[1q82]], [[3cxc]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+antibiotic | + | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[1q7y]], [[1q81]], [[1q82]], [[3cxc]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+antibiotic - ''Halobacterium marismortui''<br /> |
[[1m90]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | [[1m90]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | ||
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===15 in 50S subunit + ribosome releasing factor (RRF)=== | ===15 in 50S subunit + ribosome releasing factor (RRF)=== | ||
| - | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+RRF | + | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+RRF<br /> |
[[2rdo]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR /> | [[2rdo]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR /> | ||
| - | ===L15 in 50S subunit + various proteins | + | ===L15 in 50S subunit + various proteins=== |
| - | [[2vhm]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix | + | [[2vhm]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> |
[[2j28]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR /> | [[2j28]] - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR /> | ||
[[1w2b]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal | [[1w2b]] - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal | ||
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===L15 in the 60S subunit=== | ===L15 in the 60S subunit=== | ||
| - | [[3izr – RPL15 in the 60S subunit – wheat | + | [[3izr]] – RPL15 in the 60S subunit – wheat<br /> |
| - | [[3o5h]], [[3o58]] - yRPL15 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast | + | [[3o5h]], [[3o58]] - yRPL15 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast<br /> |
[[1s1i]] - yRPL15 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR /> | [[1s1i]] - yRPL15 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR /> | ||
| - | [[3jyw – RPL15 in 60S subunit – Cryo EM – Thermomyces lanuginosus | + | [[3jyw]] – RPL15 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus'' |
Revision as of 10:10, 31 March 2011
Ribosomal protein L15 (RPL15) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It binds to 23S RRNA.
Contents |
3D Structures of Ribosomal protein L15
L15 in 50S subunit+RNA
2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy – TtRPL15 in 50S subunit+RNA fragments - Thermus thermophilus
2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 2wrj, 2wrl, 2wro, 2wrr, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47 , 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3pyo, 3pyr, 3pyt, 3pyv, 2xtg, 2xux, 2xqe - TtRPL15 in 50S subunit+5S RRNA+23S RRNA
3fin - TtRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
2wwq – EcRPL15 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3oas, 3oat, 3ofd, 3og0, 3ofq, 1vt2, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny - EcRPL15 in 50S subunit+5S RRNA+23S RRNA
3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86 - EcRPL15 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
3kcr - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase
3bbo - RPL15 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach
2zjq, 2zjr, 1nkw - DrRPL15 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
1kqs, 1qvg - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA - Haloarcula marismortui
1jj2, 1ffk - HmRPL15P in 50S subunit+5S RRNA+23S RRNA
1q86 - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+CCA-Phe-caproic acid-biotin
1qvf - HmRPL15P in 50S subunit+5S RRNA+23S RRNA + deacylated tRNA minihelix
3iy9 – RPL15 in 50S subunit – Leishmania taretolae
L15 in 50S subunit + antibiotics
3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - DrRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
2qam, 2qao, 2qba, 2qbc, 2qoz, 2qp1, 3ofc, 3ofz, 3ofr, 3orb - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5 - TtRPL15 in 50S subunit+5S RRNA+23S RRNA+antibiotic
1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 1q7y, 1q81, 1q82, 3cxc - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+antibiotic - Halobacterium marismortui
1m90 - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
L15 in large + small ribosomal subunit
1ml5 - EcRPL15 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM
15 in 50S subunit + ribosome releasing factor (RRF)
2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+RRF
2rdo - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM
L15 in 50S subunit + various proteins
2vhm - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
2j28 - EcRPL15 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
1w2b - HmRPL15P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
L15 in the 60S subunit
3izr – RPL15 in the 60S subunit – wheat
3o5h, 3o58 - yRPL15 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
1s1i - yRPL15 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM
3jyw – RPL15 in 60S subunit – Cryo EM – Thermomyces lanuginosus
