Ribosomal protein L18
From Proteopedia
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===RPL18=== | ===RPL18=== | ||
| - | [[1ovy – RPL18 – Geobacillus stearothermophilus ]] - NMR<BR /> | + | [[1ovy]] – RPL18 – Geobacillus stearothermophilus ]] - NMR<BR /> |
| - | [[1ily – TtRPL18 –Thermus thermophilus]] - NMR<BR /> | + | [[1ily]] – TtRPL18 –Thermus thermophilus]] - NMR<BR /> |
===L18 in 50S subunit+RNA=== | ===L18 in 50S subunit+RNA=== | ||
| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy – TtRPL18 in 50S subunit+RNA fragments | + | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL18 in 50S subunit+RNA fragments |
[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA | ||
[[3fin]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | [[3fin]] - TtRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | ||
| - | [[2wwq – EcRPL18 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli | + | [[2wwq]] – EcRPL18 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli |
[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny ]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny ]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA | ||
[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR /> | ||
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[[2zjq]], [[2zjr]], [[1nkw]] - DrRPL18 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL18 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans | ||
[[1kqs]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+CCA]] - Haloarcula marismortui | [[1kqs]] - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+CCA]] - Haloarcula marismortui | ||
| - | [[1jj2]], [[1ffk- HmRPL18P in 50S subunit+5S RRNA+23S RRNA | + | [[1jj2]], [[1ffk]]- HmRPL18P in 50S subunit+5S RRNA+23S RRNA |
===L18 in 50S subunit + antibiotics=== | ===L18 in 50S subunit + antibiotics=== | ||
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[[3o5h]], [[3o58]] - yRPL18 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast | [[3o5h]], [[3o58]] - yRPL18 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast | ||
[[1s1i]] - yRPL18 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR /> | [[1s1i]] - yRPL18 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR /> | ||
| - | [[3jyw – RPL18 in 60S subunit – Cryo EM | + | [[3jyw]] – RPL18 in 60S subunit – Cryo EM – Thermomyces lanuginosus |
| - | [[2ftc]] - RPL18 in 60S subunit+16S RRNA – Cryo EM | + | [[2ftc]] - RPL18 in 60S subunit+16S RRNA – Cryo EM – bovine |
| - | [[3izr – RPL18 in the 60S subunit – wheat | + | [[3izr]] – RPL18 in the 60S subunit – wheat |
===L18 in large + small ribosomal subunit=== | ===L18 in large + small ribosomal subunit=== | ||
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===L18 in the 80S ribosome=== | ===L18 in the 80S ribosome=== | ||
| - | [[2zkr – RPL18 in 80S ribosome – dog – Cryo EM<BR /> | + | [[2zkr]] – RPL18 in 80S ribosome – dog – Cryo EM<BR /> |
Revision as of 11:03, 31 March 2011
Ribosomal protein L18 (RPL18) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL18 binds to 5S and 23S RRNA.
3D Structures of Ribosomal protein L18
RPL18
1ovy – RPL18 – Geobacillus stearothermophilus ]] - NMR
1ily – TtRPL18 –Thermus thermophilus]] - NMR
L18 in 50S subunit+RNA
2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy – TtRPL18 in 50S subunit+RNA fragments
2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 2wrj, 2wrl, 2wro, 2wrr, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47 , 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3pyo, 3pyr, 3pyt, 3pyv, 2xtg, 2xux, 2xqe - TtRPL18 in 50S subunit+5S RRNA+23S RRNA
3fin - TtRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
2wwq – EcRPL18 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3oas, 3oat, 3ofd, 3og0, 3ofq, 1vt2, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny - EcRPL18 in 50S subunit+5S RRNA+23S RRNA
3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86 - EcRPL18 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
3kcr - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase
3bbo - RPL18 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM
– spinach
2zjq, 2zjr, 1nkw - DrRPL18 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
1kqs - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+CCA]] - Haloarcula marismortui
1jj2, 1ffk- HmRPL18P in 50S subunit+5S RRNA+23S RRNA
L18 in 50S subunit + antibiotics
3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip - DrRPL18 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+antibiotic 2qam, 2qao, 2qba, 2qbc, 2qoz, 2qp1, 3ofc, 3ofz, 3ofr, 3orb - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+antibiotic 3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5 - TtRPL18 in 50S subunit+5S RRNA+23S RRNA+antibiotic 1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cxc - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+antibiotic 1m90 - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
L18 in 50S subunit + ribosome releasing factor (RRF)
2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+RRF
2rdo - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM
L18 in 50S subunit + various proteins
2vhm - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
2j28 - EcRPL18 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
1w2b - HmRPL18P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
L18 in the 60S subunit
3o5h, 3o58 - yRPL18 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast
1s1i - yRPL18 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM
3jyw – RPL18 in 60S subunit – Cryo EM – Thermomyces lanuginosus
2ftc - RPL18 in 60S subunit+16S RRNA – Cryo EM – bovine
3izr – RPL18 in the 60S subunit – wheat
L18 in large + small ribosomal subunit
1ml5 - EcRPL18 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM
L18 in the 80S ribosome
2zkr – RPL18 in 80S ribosome – dog – Cryo EM
