SandboxLKT
From Proteopedia
(Difference between revisions)
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caption='Aspartate receptor ligand binding domain (1wat)' scene='User:Lynmarie_K_Thompson/Sandbox_1/Loadedfrompdb/4'/> | caption='Aspartate receptor ligand binding domain (1wat)' scene='User:Lynmarie_K_Thompson/Sandbox_1/Loadedfrompdb/4'/> | ||
| - | === Ligand-binding domain === | ||
| + | '''Asp Receptor Ligand-binding domain''' | ||
| + | Overall structure | ||
| - | The spinning protein (<scene name='User:Lynmarie_K_Thompson/Sandbox_1/Loadedfrompdb/4'>Initial view</scene>) ) is the ligand binding domain of the aspartate receptor with the <scene name='SandboxLKT/Asp_ligand/5'>aspartate ligand</scene> bound. | + | The spinning protein (<scene name='User:Lynmarie_K_Thompson/Sandbox_1/Loadedfrompdb/4'>Initial view</scene>) ) is the ligand binding domain of the aspartate receptor with the <scene name='SandboxLKT/Asp_ligand/5'>aspartate ligand</scene> bound. The protein is a dimer of two 4-helix bundles. <scene name='colorSTRUCTURE'>structure</scene> |
Interactions that stabilize ligand binding include hydrogen bonding from Tyr149 and Gln152 backbone carbonyls and Thr154 sidechain OH to the <scene name='SandboxLKT/Asp_ligand_aminohbonds/5'>ligand amino group</scene> and hydrogen bonding from the sidechain nitrogens of Arg64, Arg69, and Arg73 to the two <scene name='SandboxLKT/Asp_ligand_carboxylhbonds/4'>ligand carboxyl groups</scene>. | Interactions that stabilize ligand binding include hydrogen bonding from Tyr149 and Gln152 backbone carbonyls and Thr154 sidechain OH to the <scene name='SandboxLKT/Asp_ligand_aminohbonds/5'>ligand amino group</scene> and hydrogen bonding from the sidechain nitrogens of Arg64, Arg69, and Arg73 to the two <scene name='SandboxLKT/Asp_ligand_carboxylhbonds/4'>ligand carboxyl groups</scene>. | ||
Revision as of 18:21, 31 March 2011
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Asp Receptor Ligand-binding domain
Overall structure
The spinning protein () ) is the ligand binding domain of the aspartate receptor with the bound. The protein is a dimer of two 4-helix bundles.
Interactions that stabilize ligand binding include hydrogen bonding from Tyr149 and Gln152 backbone carbonyls and Thr154 sidechain OH to the and hydrogen bonding from the sidechain nitrogens of Arg64, Arg69, and Arg73 to the two .
