Template:STRUCTURE 1akh

From Proteopedia

(Difference between revisions)

Revision as of 12:51, 28 April 2011

Gene:

MAT A1 RESIDUES 66 - 126 (Saccharomyces cerevisiae), MAT ALPHA2 RESIDUES 128 - 210 (Saccharomyces cerevisiae)

Structural annotation:
Resources:	CATH : 1Akha00, 1Akhb00 InterPro : Ipr001356, Ipr000047, Ipr012287, Ipr009057 Pfam : PF00046 SCOP : d1akha_, d1akhb_ UniProt : P01366, Q6B2C0

Functional annotation:
Cellular component:	nucleus
Biological process:	regulation of transcription transcription regulation of transcription, DNA-dependent regulation of transcription, mating-type specific donor selection
Molecular function:	sequence-specific DNA binding DNA binding transcription corepressor activity transcription factor activity DNA bending activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1akh"

@@ Line 1: / Line 1: @@
 {{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1akh]], resolution 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1akh]], [[Resolution|resolution]] 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |GENE= MAT A1 RESIDUES 66 - 126 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]), MAT ALPHA2 RESIDUES 128 - 210 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086 homeodomain], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00046 Homeobox]</span>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1akh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1akh OCA], [http://www.ebi.ac.uk/pdbsum/1akh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1akh RCSB]</span>
 |FUNCTION={{GO|id=GO:0043565 | text = sequence-specific DNA binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0003714 | text = transcription corepressor activity}}{{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0008301 | text = DNA bending activity}}
@@ Line 8: / Line 7: @@
 |COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhA00 1Akha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1akhB00 1Akhb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001356 Ipr001356], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000047 Ipr000047], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012287 Ipr012287], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009057 Ipr009057]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00046 PF00046]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15980 d1akha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=15985 d1akhb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P01366 P01366], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q6B2C0 Q6B2C0]</span>
-|CONSURF={{!}}-
+|uPDB=1AKH|CONSURF={{!}}-
 {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Template:STRUCTURE 1akh

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Revision as of 12:51, 28 April 2011

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