Group:MUZIC:Myopodin

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==MYOPODIN==
==MYOPODIN==
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Myopodin protein, encoded by the gene SYNPO2[http://www.uniprot.org/uniprot/Q9UMS6], was first describe in 2001 by Weins ''et al.'' is widely expressed in striated- and smooth-muscle cells <ref> PMID:11673475 </ref> <ref> PMID:12869577 </ref> (Weins et al., 2001; Nelander et al., 2003), several reports described the expression of alternative myopodin isoforms in other human cells or tissues PMID:18371299 </ref> PMID:11696420</ref> PMID:12917631 </ref> PMID:18588515 </ref> (De Ganck et al., 2008; Lin et al., 2001; Sanchez-Carbayo et al., 2003; Schroeter et al., 2008). Myopodin is a dual compartment protein that displays actin-bundling activity and redistributes between the nucleus and the cytoplasm in a differentiation-dependent and stress-induced fashion. The gene encoding Myopodin protein its form from 6 exons and codify for a protein of 80 kDa in skeletal muscle and 95kDa in the heart, the cause of this size difference remains to be established, but for several reasons, it appears to be due to post-translational modifications. Beyond the first 3 identified Isoforms, another 3 isoforms have been recently identify PMID:20554076 </ref> (Linneman et al. JCB 2010).
+
Myopodin protein, encoded by the gene SYNPO2[http://www.uniprot.org/uniprot/Q9UMS6], was first describe in 2001 by Weins ''et al.'' is widely expressed in striated- and smooth-muscle cells <ref> PMID:11673475 </ref> <ref> PMID:12869577 </ref> (Weins et al., 2001; Nelander et al., 2003), several reports described the expression of alternative myopodin isoforms in other human cells or tissues <ref> PMID:18371299 </ref> <ref> PMID:11696420</ref> <ref> PMID:12917631 </ref> <ref> PMID:18588515 </ref> (De Ganck et al., 2008; Lin et al., 2001; Sanchez-Carbayo et al., 2003; Schroeter et al., 2008). Myopodin is a dual compartment protein that displays actin-bundling activity and redistributes between the nucleus and the cytoplasm in a differentiation-dependent and stress-induced fashion. The gene encoding Myopodin protein its form from 6 exons and codify for a protein of 80 kDa in skeletal muscle and 95kDa in the heart, the cause of this size difference remains to be established, but for several reasons, it appears to be due to post-translational modifications. Beyond the first 3 identified Isoforms, another 3 isoforms have been recently identify <ref> <ref> PMID:20554076 </ref> (Linneman et al. JCB 2010).
In undifferentiated myoblasts, myopodin is expressed preferentially in the nucleus and only weakly in the cytoplasm. In differentiated myotubes it is incorporated into the Z-disc and shows no detectable nuclear expression. Notably, this redistribution coincides with an increase in protein expression. Together, these findings indicate that myopodin may be involved in the regulation of myocyte differentiation (Weins et al. 2001). Myopodin gene was identified as a tumor suppressor gene that is frequently deleted in aggressive prostate cancer. Expression of myopodin protein suppresses both tumor growth and metastasis in vitro and in vivo.
In undifferentiated myoblasts, myopodin is expressed preferentially in the nucleus and only weakly in the cytoplasm. In differentiated myotubes it is incorporated into the Z-disc and shows no detectable nuclear expression. Notably, this redistribution coincides with an increase in protein expression. Together, these findings indicate that myopodin may be involved in the regulation of myocyte differentiation (Weins et al. 2001). Myopodin gene was identified as a tumor suppressor gene that is frequently deleted in aggressive prostate cancer. Expression of myopodin protein suppresses both tumor growth and metastasis in vitro and in vivo.
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== Myopodin Interactions ==
== Myopodin Interactions ==
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Actin was the first binding partner of synaptopodin to be identified PMID:9314539 </ref>(Mundel et al. 1997) and is probably the most important partner. Myopodin has a novel actin binding site (Weins et al. 2001) that was identified by producing truncated fragments from myopodin. The smallest fragment that bound to F-actin contained residues 410–563 of mouse myopodin.
+
Actin was the first binding partner of synaptopodin to be identified <ref> PMID:9314539 </ref>(Mundel et al. 1997) and is probably the most important partner. Myopodin has a novel actin binding site (Weins et al. 2001) that was identified by producing truncated fragments from myopodin. The smallest fragment that bound to F-actin contained residues 410–563 of mouse myopodin.
-
Myopodin binds to α-actinin. That interaction has been shown to involve the spectrin filament domain repeat region of α-actinin PMID:16450054 </ref> (Pham and Chalovich 2006). Synaptopodin family members might be involved in the organization and anchoring of actin in the cell and might be necessary for the correct localization of α-actinin. That is supported by recent findings that myopodin expression precedes α-actinin expression PMID:20554076 </ref> (Linnemann et al. 2010).
+
Myopodin binds to α-actinin. That interaction has been shown to involve the spectrin filament domain repeat region of α-actinin <ref> PMID:16450054 </ref> (Pham and Chalovich 2006). Synaptopodin family members might be involved in the organization and anchoring of actin in the cell and might be necessary for the correct localization of α-actinin. That is supported by recent findings that myopodin expression precedes α-actinin expression <ref> PMID:20554076 </ref> (Linnemann et al. 2010).
-
A newly identified filamin-binding region within the molecule, by performing yeast two-hybrid assays using carboxy-terminally and/or amino-terminally truncated constructs PMID:20554076 </ref> (Linnemann et al. 2010). The interaction was mapped to a fragment encompassing amino acids 240–521 of myopodin, i.e. a region that contains two of the previously described homology regions shared by myopodin and synaptopodin PMID:11696420</ref> (Lin et al., 2001).
+
A newly identified filamin-binding region within the molecule, by performing yeast two-hybrid assays using carboxy-terminally and/or amino-terminally truncated constructs <ref> PMID:20554076 </ref> (Linnemann et al. 2010). The interaction was mapped to a fragment encompassing amino acids 240–521 of myopodin, i.e. a region that contains two of the previously described homology regions shared by myopodin and synaptopodin <ref> PMID:11696420</ref> (Lin et al., 2001).
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The alternative transcription offers the possibility of expression of two isoforms of Myopodin, which probably differ in their binding properties for these PDZ binding domain detected, however, there is preliminary evidence that the PDZ binding domain from Myopodin interacts with C terminal part of Synemin PMID:16631741 </ref> (Vakeel, 2006).
+
The alternative transcription offers the possibility of expression of two isoforms of Myopodin, which probably differ in their binding properties for these PDZ binding domain detected, however, there is preliminary evidence that the PDZ binding domain from Myopodin interacts with C terminal part of Synemin <ref> PMID:16631741 </ref> (Vakeel, 2006).
[[Image:Myopodin interaction with FLNC.jpg.png|700px]] [[Image:MYO PDZ BD.pdb]]
[[Image:Myopodin interaction with FLNC.jpg.png|700px]] [[Image:MYO PDZ BD.pdb]]

Revision as of 14:55, 3 July 2011

Prediction of the PDZ binding domain of Myopodin . Lambert et al. ESyPred3D:Prediction of Proteins 3D structures. Bioinformatics 2002)

Drag the structure with the mouse to rotate

MYOPODIN

Myopodin protein, encoded by the gene SYNPO2[1], was first describe in 2001 by Weins et al. is widely expressed in striated- and smooth-muscle cells [1] [2] (Weins et al., 2001; Nelander et al., 2003), several reports described the expression of alternative myopodin isoforms in other human cells or tissues [3] [4] [5] [6] (De Ganck et al., 2008; Lin et al., 2001; Sanchez-Carbayo et al., 2003; Schroeter et al., 2008). Myopodin is a dual compartment protein that displays actin-bundling activity and redistributes between the nucleus and the cytoplasm in a differentiation-dependent and stress-induced fashion. The gene encoding Myopodin protein its form from 6 exons and codify for a protein of 80 kDa in skeletal muscle and 95kDa in the heart, the cause of this size difference remains to be established, but for several reasons, it appears to be due to post-translational modifications. Beyond the first 3 identified Isoforms, another 3 isoforms have been recently identify [7] (Linneman et al. JCB 2010). In undifferentiated myoblasts, myopodin is expressed preferentially in the nucleus and only weakly in the cytoplasm. In differentiated myotubes it is incorporated into the Z-disc and shows no detectable nuclear expression. Notably, this redistribution coincides with an increase in protein expression. Together, these findings indicate that myopodin may be involved in the regulation of myocyte differentiation (Weins et al. 2001). Myopodin gene was identified as a tumor suppressor gene that is frequently deleted in aggressive prostate cancer. Expression of myopodin protein suppresses both tumor growth and metastasis in vitro and in vivo.


500x


Myopodin Interactions

Actin was the first binding partner of synaptopodin to be identified [8](Mundel et al. 1997) and is probably the most important partner. Myopodin has a novel actin binding site (Weins et al. 2001) that was identified by producing truncated fragments from myopodin. The smallest fragment that bound to F-actin contained residues 410–563 of mouse myopodin. Myopodin binds to α-actinin. That interaction has been shown to involve the spectrin filament domain repeat region of α-actinin [9] (Pham and Chalovich 2006). Synaptopodin family members might be involved in the organization and anchoring of actin in the cell and might be necessary for the correct localization of α-actinin. That is supported by recent findings that myopodin expression precedes α-actinin expression [10] (Linnemann et al. 2010). A newly identified filamin-binding region within the molecule, by performing yeast two-hybrid assays using carboxy-terminally and/or amino-terminally truncated constructs [11] (Linnemann et al. 2010). The interaction was mapped to a fragment encompassing amino acids 240–521 of myopodin, i.e. a region that contains two of the previously described homology regions shared by myopodin and synaptopodin [12] (Lin et al., 2001). The alternative transcription offers the possibility of expression of two isoforms of Myopodin, which probably differ in their binding properties for these PDZ binding domain detected, however, there is preliminary evidence that the PDZ binding domain from Myopodin interacts with C terminal part of Synemin [13] (Vakeel, 2006).

Image:Myopodin interaction with FLNC.jpg.png Image:MYO PDZ BD.pdb

References

  1. Weins A, Schwarz K, Faul C, Barisoni L, Linke WA, Mundel P. Differentiation- and stress-dependent nuclear cytoplasmic redistribution of myopodin, a novel actin-bundling protein. J Cell Biol. 2001 Oct 29;155(3):393-404. Epub 2001 Oct 22. PMID:11673475 doi:10.1083/jcb.200012039
  2. Nelander S, Mostad P, Lindahl P. Prediction of cell type-specific gene modules: identification and initial characterization of a core set of smooth muscle-specific genes. Genome Res. 2003 Aug;13(8):1838-54. Epub 2003 Jul 17. PMID:12869577 doi:10.1101/gr.1197303
  3. De Ganck A, De Corte V, Staes A, Gevaert K, Vandekerckhove J, Gettemans J. Multiple isoforms of the tumor suppressor myopodin are simultaneously transcribed in cancer cells. Biochem Biophys Res Commun. 2008 May 30;370(2):269-73. Epub 2008 Mar 25. PMID:18371299 doi:10.1016/j.bbrc.2008.03.086
  4. Lin F, Yu YP, Woods J, Cieply K, Gooding B, Finkelstein P, Dhir R, Krill D, Becich MJ, Michalopoulos G, Finkelstein S, Luo JH. Myopodin, a synaptopodin homologue, is frequently deleted in invasive prostate cancers. Am J Pathol. 2001 Nov;159(5):1603-12. PMID:11696420 doi:10.1016/S0002-9440(10)63006-4
  5. Sanchez-Carbayo M, Schwarz K, Charytonowicz E, Cordon-Cardo C, Mundel P. Tumor suppressor role for myopodin in bladder cancer: loss of nuclear expression of myopodin is cell-cycle dependent and predicts clinical outcome. Oncogene. 2003 Aug 14;22(34):5298-305. PMID:12917631 doi:http://dx.doi.org/10.1038/sj.onc.1206616
  6. Schroeter MM, Beall B, Heid HW, Chalovich JM. In vitro characterization of native mammalian smooth-muscle protein synaptopodin 2. Biosci Rep. 2008 Aug;28(4):195-203. PMID:18588515 doi:10.1042/BSR20080079
  7. <ref> PMID:20554076 </li> <li id="cite_note-7">[[#cite_ref-7|↑]] Mundel P, Heid HW, Mundel TM, Kruger M, Reiser J, Kriz W. Synaptopodin: an actin-associated protein in telencephalic dendrites and renal podocytes. J Cell Biol. 1997 Oct 6;139(1):193-204. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9314539 9314539] </li> <li id="cite_note-8">[[#cite_ref-8|↑]] Pham M, Chalovich JM. Smooth muscle alpha-actinin binds tightly to fesselin and attenuates its activity toward actin polymerization. J Muscle Res Cell Motil. 2006;27(1):45-51. Epub 2006 Feb 1. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16450054 16450054] doi:[http://dx.doi.org/10.1007/s10974-005-9053-2 10.1007/s10974-005-9053-2]</li> <li id="cite_note-9">[[#cite_ref-9|↑]] Linnemann A, van der Ven PF, Vakeel P, Albinus B, Simonis D, Bendas G, Schenk JA, Micheel B, Kley RA, Furst DO. The sarcomeric Z-disc component myopodin is a multiadapter protein that interacts with filamin and alpha-actinin. Eur J Cell Biol. 2010 Sep;89(9):681-92. Epub 2010 May 31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/20554076 20554076] doi:[http://dx.doi.org/10.1016/j.ejcb.2010.04.004 10.1016/j.ejcb.2010.04.004]</li> <li id="cite_note-10">[[#cite_ref-10|↑]] Linnemann A, van der Ven PF, Vakeel P, Albinus B, Simonis D, Bendas G, Schenk JA, Micheel B, Kley RA, Furst DO. The sarcomeric Z-disc component myopodin is a multiadapter protein that interacts with filamin and alpha-actinin. Eur J Cell Biol. 2010 Sep;89(9):681-92. Epub 2010 May 31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/20554076 20554076] doi:[http://dx.doi.org/10.1016/j.ejcb.2010.04.004 10.1016/j.ejcb.2010.04.004]</li> <li id="cite_note-11">[[#cite_ref-11|↑]] Lin F, Yu YP, Woods J, Cieply K, Gooding B, Finkelstein P, Dhir R, Krill D, Becich MJ, Michalopoulos G, Finkelstein S, Luo JH. Myopodin, a synaptopodin homologue, is frequently deleted in invasive prostate cancers. Am J Pathol. 2001 Nov;159(5):1603-12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11696420 11696420] doi:[http://dx.doi.org/10.1016/S0002-9440(10)63006-4 10.1016/S0002-9440(10)63006-4]</li> <li id="cite_note-12">[[#cite_ref-12|↑]] van der Ven PF, Ehler E, Vakeel P, Eulitz S, Schenk JA, Milting H, Micheel B, Furst DO. Unusual splicing events result in distinct Xin isoforms that associate differentially with filamin c and Mena/VASP. Exp Cell Res. 2006 Jul 1;312(11):2154-67. Epub 2006 Apr 24. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16631741 16631741] doi:[http://dx.doi.org/S0014-4827(06)00110-8 S0014-4827(06)00110-8]</li></ol></ref>

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