User:Robert Dutnall/Sandbox 1 alpha helix
From Proteopedia
(Difference between revisions)
| Line 13: | Line 13: | ||
::Right click to bring up an options menu | ::Right click to bring up an options menu | ||
| - | == | + | ==An alpha helix== |
<Structure load='Tut_alpha_helix.pdb' size='500' frame='true' align='left' caption='' scene='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_load/1'/> | <Structure load='Tut_alpha_helix.pdb' size='500' frame='true' align='left' caption='' scene='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_load/1'/> | ||
| - | + | This is a 19 amino acid chain in alpha helical conformation. | |
All the atoms are shown in this initial orientation (C = green; N = blue; O = red; S = yellow; H = white). <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_load'>Click here at any time to return to this view.</scene> | All the atoms are shown in this initial orientation (C = green; N = blue; O = red; S = yellow; H = white). <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_load'>Click here at any time to return to this view.</scene> | ||
<scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_mainchain/3'>Click here to show only the polypeptide mainchain.</scene> | <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_mainchain/3'>Click here to show only the polypeptide mainchain.</scene> | ||
| - | + | Identify the N- and C-termini? <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_mainchain_label/3'>Click here to see if you were correct.</scene> | |
More text here | More text here | ||
| - | <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_mainchain_label_hbonds/ | + | <scene name='User:Robert_Dutnall/Sandbox_1_alpha_helix/A_helix_mainchain_label_hbonds/3'>Click here to add hydrogen bonds (purple).</scene> |
More text here | More text here | ||
Revision as of 16:50, 25 August 2011
Biochemistry Tutorial #2 - Secondary Structure
Blah, blah, blah
Note: in these tutorials, the images are 3D interactive images. You can manipulate them as you wish to get a better view of the molecules.
You can rotate the structure by holding down the right mouse button and dragging.
Other things you can do:
- To rotate: left drag
- To Zoom: scroll button or shift + left drag
- To Translate: ctrl + right drag
- Right click to bring up an options menu
An alpha helix
|
This is a 19 amino acid chain in alpha helical conformation. All the atoms are shown in this initial orientation (C = green; N = blue; O = red; S = yellow; H = white).
Identify the N- and C-termini?
More text here
More text here
More text here
