1b0i
From Proteopedia
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| - | [[Image:1b0i.gif|left|200px]]<br /><applet load="1b0i" size=" | + | [[Image:1b0i.gif|left|200px]]<br /><applet load="1b0i" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1b0i, resolution 2.4Å" /> | caption="1b0i, resolution 2.4Å" /> | ||
'''ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS'''<br /> | '''ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1B0I is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudoalteromonas_haloplanktis Pseudoalteromonas haloplanktis] with CA and CL as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] Known structural/functional Sites: <scene name='pdbsite=ACT:Active Site'>ACT</scene>, <scene name='pdbsite=CAB:Ca Binding Site'>CAB</scene> and <scene name='pdbsite=CLB:Chloride Binding Site'>CLB</scene>. Full crystallographic information is available from [http:// | + | 1B0I is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudoalteromonas_haloplanktis Pseudoalteromonas haloplanktis] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Alpha-amylase Alpha-amylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.1 3.2.1.1] Known structural/functional Sites: <scene name='pdbsite=ACT:Active+Site'>ACT</scene>, <scene name='pdbsite=CAB:Ca+Binding+Site'>CAB</scene> and <scene name='pdbsite=CLB:Chloride+Binding+Site'>CLB</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B0I OCA]. |
==Reference== | ==Reference== | ||
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[[Category: psychrophilic enzyme]] | [[Category: psychrophilic enzyme]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:32:18 2008'' |
Revision as of 07:32, 3 February 2008
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ALPHA-AMYLASE FROM ALTEROMONAS HALOPLANCTIS
Overview
Background:. Enzymes from psychrophilic (cold-adapted) microorganisms, operate at temperatures close to 0 degreesC, where the activity of their, mesophilic and thermophilic counterparts is drastically reduced. It has, generally been assumed that thermophily is associated with rigid proteins, whereas psychrophilic enzymes have a tendency to be more flexible., Results:. Insights into the cold adaptation of proteins are gained on the, basis of a psychrophilic protein's molecular structure. To this end, we, have determined the structure of the recombinant form of a psychrophilic, alpha-amylase from Alteromonas haloplanctis at 2.4 A resolution. We have, compared this with the structure of the wild-type enzyme, recently solved, at 2.0 A resolution, and with available structures of their mesophilic, counterparts. These comparative studies have enabled us to identify, possible determinants of cold adaptation. Conclusions:. We propose that an, increased resilience of the molecular surface and a less rigid protein, core, with less interdomain interactions, are determining factors of the, conformational flexibility that allows efficient enzyme catalysis in cold, environments.
About this Structure
1B0I is a Single protein structure of sequence from Pseudoalteromonas haloplanktis with and as ligands. Active as Alpha-amylase, with EC number 3.2.1.1 Known structural/functional Sites: , and . Full crystallographic information is available from OCA.
Reference
Structures of the psychrophilic Alteromonas haloplanctis alpha-amylase give insights into cold adaptation at a molecular level., Aghajari N, Feller G, Gerday C, Haser R, Structure. 1998 Dec 15;6(12):1503-16. PMID:9862804
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