1h9y
From Proteopedia
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| - | [[Image:1h9y.jpg|left|200px]]<br /><applet load="1h9y" size=" | + | [[Image:1h9y.jpg|left|200px]]<br /><applet load="1h9y" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1h9y, resolution 2.4Å" /> | caption="1h9y, resolution 2.4Å" /> | ||
'''CYTOCHROME CD1 NITRITE REDUCTASE, REDUCED FORM COMPLEXED TO CN'''<br /> | '''CYTOCHROME CD1 NITRITE REDUCTASE, REDUCED FORM COMPLEXED TO CN'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1H9Y is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Paracoccus_pantotrophus Paracoccus pantotrophus] with SO4, CYN, HEC and DHE as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=C1A:The C Hem Is The Point Of Electron Entry'>C1A</scene>, <scene name='pdbsite=C1B:The C Hem Is The Point Of Electron Entry'>C1B</scene>, <scene name='pdbsite=D1A:The D Hem Is The Site Of Catalytic Activity'>D1A</scene> and <scene name='pdbsite=D1B:The D Hem Is The Site Of Catalytic Activity'>D1B</scene>. Full crystallographic information is available from [http:// | + | 1H9Y is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Paracoccus_pantotrophus Paracoccus pantotrophus] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=CYN:'>CYN</scene>, <scene name='pdbligand=HEC:'>HEC</scene> and <scene name='pdbligand=DHE:'>DHE</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=C1A:The+C+Hem+Is+The+Point+Of+Electron+Entry'>C1A</scene>, <scene name='pdbsite=C1B:The+C+Hem+Is+The+Point+Of+Electron+Entry'>C1B</scene>, <scene name='pdbsite=D1A:The+D+Hem+Is+The+Site+Of+Catalytic+Activity'>D1A</scene> and <scene name='pdbsite=D1B:The+D+Hem+Is+The+Site+Of+Catalytic+Activity'>D1B</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H9Y OCA]. |
==Reference== | ==Reference== | ||
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[[Category: oxidoreductase]] | [[Category: oxidoreductase]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:48:09 2008'' |
Revision as of 07:48, 3 February 2008
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CYTOCHROME CD1 NITRITE REDUCTASE, REDUCED FORM COMPLEXED TO CN
Overview
Cytochrome cd(1) nitrite reductase is a bifunctional enzyme, which can, catalyze the 1-electron reduction of nitrite to nitric oxide and the, 4-electron reduction of dioxygen to water. Here we describe the structure, of reduced nitrite reductase, crystallized under anaerobic conditions. The, structure reveals substantial domain rearrangements with the c domain, rotated by 60 degrees and shifted by approximately 20 A compared with, previously known structures from crystals grown under oxidizing, conditions. This alternative conformation gives rise to different electron, transfer routes between the c and d(1) domains and points to the, involvement of elements of very large structural changes in the function, in this enzyme. In the present structure, the c heme has a His-69/Met-106, ligation, and this ligation does not change upon oxidation in the crystal., The d(1) heme is penta-coordinated, and the d(1) iron is displaced from, the heme plane by 0.5 A toward the proximal ligand, His-200. After, oxidation, the iron moves into the d(1) heme plane. A surprising finding, is that although reduced nitrite reductase can be readily oxidized by, dioxygen in the new crystal, it cannot turnover with its other substrate, nitrite. The results suggest that the rearrangement of the domains affects, catalysis and substrate selectivity.
About this Structure
1H9Y is a Single protein structure of sequence from Paracoccus pantotrophus with , , and as ligands. Known structural/functional Sites: , , and . Full crystallographic information is available from OCA.
Reference
The Structure of an alternative form of Paracoccus pantotrophus cytochrome cd(1) nitrite reductase., Sjogren T, Hajdu J, J Biol Chem. 2001 Aug 3;276(31):29450-5. Epub 2001 May 23. PMID:11373294
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Categories: Paracoccus pantotrophus | Single protein | Hajdu, J. | Sjogren, T. | CYN | DHE | HEC | SO4 | Cn | Enzyme | Nitrite reductase | Oxidoreductase
