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Sandbox 34
From Proteopedia
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<StructureSection load='9pap' size='500' side='right' caption='Structure of 9PAP (PDB entry [[9pap]])' scene='Sandbox_34/9pap_without_solvent_meoh/3'> | <StructureSection load='9pap' size='500' side='right' caption='Structure of 9PAP (PDB entry [[9pap]])' scene='Sandbox_34/9pap_without_solvent_meoh/3'> | ||
'''Papain''' is a cysteine protease, also known as '''papaya proteinase I''',from the peptidase C1 family. Naturally found in the latex of the papaya fruit, one of the most common uses of papain is as a meat tenderizer because of its ability to hydrolyze esters and amides.<ref>IUBMB Enzyme Nomenclature: www.chem.qmul.ac.uk/iubmb/enzyme/EC3/4/22/2.html</ref> Another common use is as a digestive aid. Papaya is commonly referenced as a preferred fruit for those suffering from gastroesophageal reflux disease due to its ability to help the the stomach with digestion of complex proteins. | '''Papain''' is a cysteine protease, also known as '''papaya proteinase I''',from the peptidase C1 family. Naturally found in the latex of the papaya fruit, one of the most common uses of papain is as a meat tenderizer because of its ability to hydrolyze esters and amides.<ref>IUBMB Enzyme Nomenclature: www.chem.qmul.ac.uk/iubmb/enzyme/EC3/4/22/2.html</ref> Another common use is as a digestive aid. Papaya is commonly referenced as a preferred fruit for those suffering from gastroesophageal reflux disease due to its ability to help the the stomach with digestion of complex proteins. | ||
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| + | == History == | ||
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| + | Papain's enzymatic use was first discovered in 1873 by G.C. Roy. Roy published his results in the Calcutta Medical Journal in the article, "The Solvent Action of Papaya Juice on Nitrogenous Articles of Food."<ref name="Worthington">http://www.worthington-biochem.com/pap/default.html</ref> In 1879, papain was named officially by Wurtz and Bouchut, who managed to partially purify the product from the sap of papaya.<ref name="Worthington" />. It wasn't until the mid-twentieth century that the complete purification and isolation of papain was achieved. In 1968, Drenth et al. determined the structure of papain by x-ray crystallography, making it the second enzyme whose structure was successfully determined by x-ray crystallography. Additionally, papain was the first cysteine protease to have its structure identified. <ref name="Worthington" /> In 1984, Kamphuis et al. determined the geometry of the active site, and the three-dimensional structure was visualized to a 1.65 Angstrom solution.<ref name="Structure">PMID:6502713</ref> Today, studies continue on the stability of papain, involving changes in environmental conditions, in addition to testing of inhibitors such as phenylmethanesulfonylfluoride (PMSF), TLCK, TPCK, aplh2-macroglobulin, heavy metals, AEBSF, antipain, cystatin, E-64, leupeptin, sulfhydryl binding agents, carbonyl reagents, and alkylating agents.<ref name="Worthington" /> | ||
</StructureSection> | </StructureSection> | ||
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<StructureSection load='9pap' size='500' side='left' caption='Structure of 9PAP (PDB entry [[9pap]])' scene='Sandbox_34/9pap_without_solvent_meoh/3'> | <StructureSection load='9pap' size='500' side='left' caption='Structure of 9PAP (PDB entry [[9pap]])' scene='Sandbox_34/9pap_without_solvent_meoh/3'> | ||
| - | Papain is a relatively simple enzyme. It consists of only one chain of 212 residues with three disulfide bonds.<ref | + | Papain is a relatively simple enzyme. It consists of only one chain of 212 residues with three disulfide bonds.<ref name="Structure" /> A modified cysteine residue with a sulhydryl group, <scene name='Sandbox_34/Entire_protein_with_ocs_focus/2'>cysteine sulfonic acid</scene>, is necessary for the activity of the enzyme.<ref>http://www.sigmaaldrich.com/life-science/metabolomics/enzyme-explorer/analytical-enzymes/papain.html</ref> |
</StructureSection> | </StructureSection> | ||
Revision as of 18:14, 13 November 2011
| Please do NOT make changes to this Sandbox. Sandboxes 30-60 are reserved for use by Biochemistry 410 & 412 at Messiah College taught by Dr. Hannah Tims during Fall 2012 and Spring 2013. |
Contents |
Papain
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Structure
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Specificity
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References
- ↑ IUBMB Enzyme Nomenclature: www.chem.qmul.ac.uk/iubmb/enzyme/EC3/4/22/2.html
- ↑ 2.0 2.1 2.2 2.3 http://www.worthington-biochem.com/pap/default.html
- ↑ 3.0 3.1 Kamphuis IG, Kalk KH, Swarte MB, Drenth J. Structure of papain refined at 1.65 A resolution. J Mol Biol. 1984 Oct 25;179(2):233-56. PMID:6502713
- ↑ http://www.sigmaaldrich.com/life-science/metabolomics/enzyme-explorer/analytical-enzymes/papain.html
