2bem
From Proteopedia
| Line 1: | Line 1: | ||
| - | [[Image:2bem.gif|left|200px]]<br /><applet load="2bem" size=" | + | [[Image:2bem.gif|left|200px]]<br /><applet load="2bem" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="2bem, resolution 1.55Å" /> | caption="2bem, resolution 1.55Å" /> | ||
'''CRYSTAL STRUCTURE OF THE SERRATIA MARCESCENS CHITIN-BINDING PROTEIN CBP21'''<br /> | '''CRYSTAL STRUCTURE OF THE SERRATIA MARCESCENS CHITIN-BINDING PROTEIN CBP21'''<br /> | ||
| Line 7: | Line 7: | ||
==About this Structure== | ==About this Structure== | ||
| - | 2BEM is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens] with SO4, NA and EDO as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=AC1:So4 Binding Site For Chain A'>AC1</scene>. Full crystallographic information is available from [http:// | + | 2BEM is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=NA:'>NA</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=AC1:So4+Binding+Site+For+Chain+A'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BEM OCA]. |
==Reference== | ==Reference== | ||
| Line 24: | Line 24: | ||
[[Category: fniii-like fold]] | [[Category: fniii-like fold]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 10:23:07 2008'' |
Revision as of 08:23, 3 February 2008
|
CRYSTAL STRUCTURE OF THE SERRATIA MARCESCENS CHITIN-BINDING PROTEIN CBP21
Overview
Chitin proteins are commonly found in bacteria that utilize chitin as a, source of energy. CBP21 is a chitin-binding protein from Serratia, marcescens, a Gram-negative soil bacterium capable of efficient chitin, degradation. When grown on chitin, S. marcescens secretes large amounts of, CBP21, along with chitin-degrading enzymes. In an attempt to understand, the molecular mechanism of CBP21 action, we have determined its crystal, structure at 1.55 angstroms resolution. This is the first structure to be, solved of a family 33 carbohydrate-binding module. The structure reveals a, "budded" fibronectin type III fold consisting of two beta-sheets, arranged, as a beta-sheet sandwich, with a 65-residue "bud" consisting of three, short helices, located between beta-strands 1 and 2. Remarkably, conserved, aromatic residues that have been suggested previously to play a role in, chitin binding were mainly found in the interior of the protein, seemingly, incapable of interacting with chitin, whereas the structure revealed a, surface patch of highly conserved, mainly hydrophilic residues. The roles, of six of these conserved surface-exposed residues (Tyr-54, Glu-55, Glu-60, His-114, Asp-182, and Asn-185) were probed by site-directed, mutagenesis and subsequent binding studies. All single point mutations, lowered the affinity of CBP21 for beta-chitin, as shown by 3-8-fold, increases in the apparent binding constant. Thus, binding of CBP21 to, chitin seems to be mediated primarily by conserved, solvent-exposed, polar, side chains.
About this Structure
2BEM is a Single protein structure of sequence from Serratia marcescens with , and as ligands. Known structural/functional Site: . Full crystallographic information is available from OCA.
Reference
Crystal structure and binding properties of the Serratia marcescens chitin-binding protein CBP21., Vaaje-Kolstad G, Houston DR, Riemen AH, Eijsink VG, van Aalten DM, J Biol Chem. 2005 Mar 25;280(12):11313-9. Epub 2004 Dec 8. PMID:15590674
Page seeded by OCA on Sun Feb 3 10:23:07 2008
