Anthrax Lethal Factor

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'''Domain III''' residues 303-383, Sequence analysis had revealed the presence of a 101-residue segment comprising five tandem repeats residues 282-382, and suggested that repeats 2-5 arose from a duplication of repeat 1. The crystal structure reveals that repeat 1 actually forms the second helix-turn element of domain II, whereas repeats 2-5 form the four helix-turn elements of the helical bundle. Required for LF activity, shares same hydrophobic surface as domain IV and its location restricts access to the active site. Also, it contributes to substrate specificity by making interactions with the substrate.<ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-3-/1'>Domain III</scene>''' (residues 303-383), contains a segment of five tandem repeats residues 282-382. This suggests that repeats 2-5 arose from a duplication of repeat 1, the second helix-turn element of domain II. Whereas repeats 2-5 form the four helix-turn elements of the helical bundle. This domain is required LF activity, shares the same hydrophobic surface as domain IV and its location restricts access to the active site. Also, it contributes to substrate specificity by making interactions with the substrate. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''Domain IV''' residues 552-776, consists of a nine-helix bundle packed against a four-stranded beta-sheet and contains a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion (Zn2+) is coordinated tetrahedrally by a water molecule and three protein side chains (Fig. 3), in an arrangement typical of the thermolysin family. Two coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <scene name='Anthrax_Lethal_Factor/Domain_4_active_site/2'>TextToBeDisplayed</scene> <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-4-/1'>Domain IV</scene>''' (residues 552-776), consists of a nine-helix bundle packed against a four-stranded beta-sheet and contains a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion is coordinated tetrahedrally by a water molecule and three protein side chains in an arrangement typical of the thermolysin family. Two of the coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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Domains II, III, and IV for the binding pocket for the substrate.
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Domains II, III, and IV for the <scene name='Anthrax_Lethal_Factor/Domain_-spacefill-/1'>binding pocket</scene> for the substrate.

Revision as of 05:30, 1 December 2011

PDB ID 1J7N

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Peter Aziz, Michal Harel, Alexander Berchansky

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