Anthrax Lethal Factor

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'''<scene name='Anthrax_Lethal_Factor/Domain_-4-/1'>Domain IV</scene>''' (residues 552-776), consists of a nine-helix bundle packed against a four-stranded beta-sheet and contains a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion is coordinated tetrahedrally by a water molecule and three protein side chains in an arrangement typical of the thermolysin family. Two of the coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-4-/1'>Domain IV</scene>''' (residues 552-776), consists of a nine-helix bundle packed against a four-stranded beta-sheet and contains a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion is coordinated tetrahedrally by a water molecule and three protein side chains in an arrangement typical of the thermolysin family. Two of the coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
Domains II, III, and IV for the <scene name='Anthrax_Lethal_Factor/Domain_-spacefill-/2'>binding pocket</scene> for the substrate.
Domains II, III, and IV for the <scene name='Anthrax_Lethal_Factor/Domain_-spacefill-/2'>binding pocket</scene> for the substrate.
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The MAPKK family of proteins are the only known cellular substrates of LF. LF cleaves near their N termini, removes the docking sequence for the downstream MAP kinase. The primary cells affected in anthrax pathogenesis are the macrophages. At low levels of LF, MAPKK-3 is cleaved inhibiting release of pro-inflammatory mediators. In contrast, high levels of LF lead to lysis of macrophages within a few hours, by an unknown mechanism. This suggests during early infection there is a delayed immune response while in late stage of infection bacterium in the bloodstream trigger macrophage lysis and the sudden release of high levels pro-inflammatory mediators. This is consistent with the septic shock symptoms seen before death. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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<scene name='Anthrax_Lethal_Factor/Domain_4_active_site/2'>TextToBeDisplayed</scene>
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<scene name='Anthrax_Lethal_Factor/Domain_4_active_site/2'>Active Site</scene>
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A zinc ion (Zn2+) is coordinated tetrahedrally by a water molecule and three protein side chains, His 686, His 690 and Glu 735. Glu 687 from the HExxH motif lies 3.5A from the water molecule, making it well positioned to act as a general base to activate the zinc-bound water during catalysis. The hydroxyl group of a tyrosine residue (Tyr 728) forms a strong hydrogen bond to the water molecule, on the opposite side of Glu 687, and probably functions as a general acid to protonate the amine leaving group. The binding pocket is not closed at its N-terminal end, so longer tails other MAPKK simply protrude beyond the pocket.<ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref> <ref name=Moayeri M, Leppla SH>PMID: 19638283</ref>
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<ref name=Moayeri M, Leppla SH>PMID: 19638283</ref>
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Revision as of 21:01, 1 December 2011

PDB ID 1J7N

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Proteopedia Page Contributors and Editors (what is this?)

Peter Aziz, Michal Harel, Alexander Berchansky

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