Testing Jmol 12.2.16
From Proteopedia
(Difference between revisions)
| Line 7: | Line 7: | ||
''echo "Dealkylation ("aging")";'' since the Jmol parser is unable to properly pair the nested quotes. | ''echo "Dealkylation ("aging")";'' since the Jmol parser is unable to properly pair the nested quotes. | ||
| - | Alex: | + | Alex:<br> |
1) It is impossible to change the color of molecules, residues, atoms etc - halos disappeared and colors are not changed. In contrast to that, it is possible to change representations - everything OK with the halos. | 1) It is impossible to change the color of molecules, residues, atoms etc - halos disappeared and colors are not changed. In contrast to that, it is possible to change representations - everything OK with the halos. | ||
| + | |||
| + | 2) When the scene was saved the orientation of the protein did not change – it was as original position of the protein. | ||
Yossi: | Yossi: | ||
1) same as Alex's 1) above. | 1) same as Alex's 1) above. | ||
Revision as of 08:59, 11 March 2012
Findings while testing Jmol 12.2.XX on Proteopedia:
?JMOLJAR=http://proteopedia.org/jmol12.2.16/JmolAppletSigned0.jar
Note that the About/Version will return 12.2.18_dev
- Inserting quoted text in an echo makes the whole scene to fail. Statements like this one is a ticket to failure
echo "Dealkylation ("aging")"; since the Jmol parser is unable to properly pair the nested quotes.
Alex:
1) It is impossible to change the color of molecules, residues, atoms etc - halos disappeared and colors are not changed. In contrast to that, it is possible to change representations - everything OK with the halos.
2) When the scene was saved the orientation of the protein did not change – it was as original position of the protein.
Yossi: 1) same as Alex's 1) above.
Proteopedia Page Contributors and Editors (what is this?)
Jaime Prilusky, Wayne Decatur, Joseph M. Steinberger, Alexander Berchansky
