User:Karl Oberholser/Sandbox 1
From Proteopedia
(Difference between revisions)
| Line 4: | Line 4: | ||
{{STRUCTURE_1uo2 | PDB=1uo2 | SCENE='User:Karl_Oberholser/Sandbox_1/Initial/2'}} | {{STRUCTURE_1uo2 | PDB=1uo2 | SCENE='User:Karl_Oberholser/Sandbox_1/Initial/2'}} | ||
Fresh molecule load | Fresh molecule load | ||
| - | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/1'> test initial 1 calculate structure</scene> | + | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/1'> test initial 1 calculate structure</scene> (select protein; calculate structure; cartoon; color structure; calculate hbonds structure) |
Fresh molecule load | Fresh molecule load | ||
| Line 13: | Line 13: | ||
Fresh molecule load | Fresh molecule load | ||
| - | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/4'>initial 4 calculate structure</scene> | + | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/4'>initial 4 calculate structure</scene> (select protein; calculate structure; cartoon; color structure; calculate hbonds structure) |
Started with initial/3 scene | Started with initial/3 scene | ||
<scene name='User:Karl_Oberholser/Sandbox_1/Initial/5'>initial 5 bs cpk</scene> | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/5'>initial 5 bs cpk</scene> | ||
| + | http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/5.spt | ||
| + | == Investigating Contact: == | ||
Fresh molecule load | Fresh molecule load | ||
<scene name='User:Karl_Oberholser/Sandbox_1/Initial/6'>initial 6 contact {:a} {:b} hbond plane</scene> | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/6'>initial 6 contact {:a} {:b} hbond plane</scene> | ||
| Line 26: | Line 28: | ||
Started with initial/5 scene | Started with initial/5 scene | ||
<scene name='User:Karl_Oberholser/Sandbox_1/Initial/9'>initial 9 contact clashes off;</scene> | <scene name='User:Karl_Oberholser/Sandbox_1/Initial/9'>initial 9 contact clashes off;</scene> | ||
| + | http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/9.spt | ||
| - | |||
| - | == Investigating Contact: == | ||
{{STRUCTURE_3mtu | PDB=3mtu | SCENE=}} | {{STRUCTURE_3mtu | PDB=3mtu | SCENE=}} | ||
Revision as of 15:11, 28 April 2012
Template:STRUCTURE 1uo2
Fresh molecule load
(select protein; calculate structure; cartoon; color structure; calculate hbonds structure)
Fresh molecule load
Fresh molecule load
Fresh molecule load (select protein; calculate structure; cartoon; color structure; calculate hbonds structure)
Started with initial/3 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/5.spt
Investigating Contact:
Fresh molecule load
Fresh molecule load
Started with initial/5 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/9.spt
