User:Karl Oberholser/Sandbox 1
From Proteopedia
| Line 38: | Line 38: | ||
Started with contact/1 | Started with contact/1 | ||
<scene name='User:Karl_Oberholser/Sandbox_1/Contact_clash/1'>contact clash 1</scene> contact phobic2 {:a} {:b} clash full | <scene name='User:Karl_Oberholser/Sandbox_1/Contact_clash/1'>contact clash 1</scene> contact phobic2 {:a} {:b} clash full | ||
| + | |||
| + | Started with contact/1 | ||
| + | <scene name='User:Karl_Oberholser/Sandbox_1/Contact_hbond/1'>contact hbond 1</scene> contact hbond {:a} {:b} hbond connect | ||
| + | |||
| + | Started with contact/1 | ||
| + | <scene name='User:Karl_Oberholser/Sandbox_1/Contact_vdw/3'>contact vdw 3</scene> contact vdw {:a} {:b} vdw surface | ||
| + | |||
| + | Started with contact/1 | ||
| + | <scene name='User:Karl_Oberholser/Sandbox_1/Contact_hbond/2'>contact hbond 2</scene> contact {:a} {:b} hbond surface | ||
| + | |||
| + | Started with contact/1 | ||
| + | <scene name='User:Karl_Oberholser/Sandbox_1/Contact_clash/2'>contact clash 2</scene> contact {:a} {:b} clash surface | ||
{{STRUCTURE_3mtu | PDB=3mtu | SCENE=}} | {{STRUCTURE_3mtu | PDB=3mtu | SCENE=}} | ||
Revision as of 00:47, 29 April 2012
Template:STRUCTURE 1uo2
Fresh molecule load
(select protein; calculate structure; cartoon; color structure; calculate hbonds structure)
Fresh molecule load
Fresh molecule load
Fresh molecule load (select protein; calculate structure; cartoon; color structure; calculate hbonds structure)
Started with initial/3 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/5.spt
Investigating Contact:
Fresh molecule load
Fresh molecule load
Started with initial/5 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/9.spt
Fresh molecule load contact phobic {:a} {:b} vdw full
Fresh molecule load Leu heptads in spacefill
Started with contact/1 contact phobic2 {:a} {:b} clash full
Started with contact/1 contact hbond {:a} {:b} hbond connect
Started with contact/1 contact vdw {:a} {:b} vdw surface
Started with contact/1 contact {:a} {:b} hbond surface
Started with contact/1 contact {:a} {:b} clash surface
