User:Karl Oberholser/Sandbox 1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 51: Line 51:
<scene name='User:Karl_Oberholser/Sandbox_1/Contact_clash/2'>contact clash 2</scene> contact {:a} {:b} clash surface
<scene name='User:Karl_Oberholser/Sandbox_1/Contact_clash/2'>contact clash 2</scene> contact {:a} {:b} clash surface
-
{{STRUCTURE_3mtu | PDB=3mtu | SCENE=}}
+
{{STRUCTURE_1htm | PDB=1htm | SCENE=}}
{{STRUCTURE_2wpy | PDB=2wpy | SCENE=}}
{{STRUCTURE_2wpy | PDB=2wpy | SCENE=}}

Revision as of 01:03, 29 April 2012


Template:STRUCTURE 1uo2 Fresh molecule load (select protein; calculate structure; cartoon; color structure; calculate hbonds structure)

Fresh molecule load

Fresh molecule load

Fresh molecule load (select protein; calculate structure; cartoon; color structure; calculate hbonds structure)

Started with initial/3 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/5.spt

Investigating Contact:

Fresh molecule load

Fresh molecule load

Started with initial/5 scene http://proteopedia.org/scripts/User:Karl_Oberholser/Sandbox_1/Initial/9.spt

Fresh molecule load contact phobic {:a} {:b} vdw full

Fresh molecule load Leu heptads in spacefill

Started with contact/1 contact phobic2 {:a} {:b} clash full

Started with contact/1 contact hbond {:a} {:b} hbond connect

Started with contact/1 contact vdw {:a} {:b} vdw surface

Started with contact/1 contact {:a} {:b} hbond surface

Started with contact/1 contact {:a} {:b} clash surface

Template:STRUCTURE 1htm

Template:STRUCTURE 2wpy

Notes and References

Proteopedia Page Contributors and Editors (what is this?)

Karl Oberholser

Personal tools