Sandbox Reserved 474

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== Structure of CRP pentamer ==
== Structure of CRP pentamer ==
In CRP, each subunit in CRP is rotated by 22° towards the five-fold axis in comparison to SAP, where the subunits are planar to each other [1]. Furthermore, an intermoleclar ion pair only forms in CRP from residues <scene name='Sandbox_Reserved_474/Glu-197/1'>Glu-197</scene> and <scene name='Sandbox_Reserved_474/Lys-123/1'>Lys-123</scene>, but this does not occur in SAP. One could deduce that by crystallizing the structure, it causes a shift of the actual ligand-binding sites on the B side of the pentamer which can effect overall binding to other significant structures.
In CRP, each subunit in CRP is rotated by 22° towards the five-fold axis in comparison to SAP, where the subunits are planar to each other [1]. Furthermore, an intermoleclar ion pair only forms in CRP from residues <scene name='Sandbox_Reserved_474/Glu-197/1'>Glu-197</scene> and <scene name='Sandbox_Reserved_474/Lys-123/1'>Lys-123</scene>, but this does not occur in SAP. One could deduce that by crystallizing the structure, it causes a shift of the actual ligand-binding sites on the B side of the pentamer which can effect overall binding to other significant structures.
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== Phosphocholine-binding ==
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It is worthy to note that the major interaction that occurs between CRP and PC is located between the phosphate group of PC and the bound calciums [1]. While the majority of the PC molecule is packed tightly against Phe-66, the rest of the molecule binds thus resulting in a phosphate moiety ester linkage [1]. The overall distance between the the charged nitrogen of PC and the acidic Glu-81 is approximately 3.8 Å and this suggests that this particular interaction is important. Because of this physical phenomenon, future drugs could be developed to potentially block the CRP from binding.
== Comparison of human CRP to other pentraxins ==
== Comparison of human CRP to other pentraxins ==

Revision as of 00:25, 3 May 2012

This Sandbox is Reserved from 13/03/2012, through 01/06/2012 for use in the course "Proteins and Molecular Mechanisms" taught by Robert B. Rose at the North Carolina State University, Raleigh, NC USA. This reservation includes Sandbox Reserved 451 through Sandbox Reserved 500.
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C-Reactive Protein

Structure of Human C-Reactive Protein (PDB entry 1b09)

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