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Sandbox Reserved 474
From Proteopedia
(Difference between revisions)
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== Structure and Function == | == Structure and Function == | ||
CRPs five promoter structures are folded into two anti-parallel <scene name='Sandbox_Reserved_474/Beta-sheet/1'>β-Sheets</scene> with flattened jellyroll topologies [2]. Each promoter contains a recognition face with a <scene name='Sandbox_Reserved_474/Phosphocholine/1'>phosphocholine</scene> binding site consisting of two coordinated <scene name='Sandbox_Reserved_474/Calcium_ion/1'>calcium </scene> ions adjacent to a hydrophobic pocket. | CRPs five promoter structures are folded into two anti-parallel <scene name='Sandbox_Reserved_474/Beta-sheet/1'>β-Sheets</scene> with flattened jellyroll topologies [2]. Each promoter contains a recognition face with a <scene name='Sandbox_Reserved_474/Phosphocholine/1'>phosphocholine</scene> binding site consisting of two coordinated <scene name='Sandbox_Reserved_474/Calcium_ion/1'>calcium </scene> ions adjacent to a hydrophobic pocket. | ||
| - | The co-crystallized structure of CRP with phosphocholine suggest that <scene name='Sandbox_Reserved_474/Phe-66/2'>Phe-66</scene> and <scene name='Sandbox_Reserved_474/Glu-81/1'>Glu-81</scene> are two very crucial residues that mediate binding between phosphocholine and CRP[2]. More specifically, Phe-66 provides specific hydrophobic interactions with the methyl groups of PC. Similarly, Glu-81 is located on the opposite end of the pocket where it interacts well with the positively charged choline nitrogen. Present on the opposite face of the pentamer is the effector face, where the presumed <scene name='Sandbox_Reserved_474/C1q/1'>C1q</scene> and Fcγ receptors bind, and at this cleft | + | The co-crystallized structure of CRP with phosphocholine suggest that <scene name='Sandbox_Reserved_474/Phe-66/2'>Phe-66</scene> and <scene name='Sandbox_Reserved_474/Glu-81/1'>Glu-81</scene> are two very crucial residues that mediate binding between phosphocholine and CRP[2]. More specifically, Phe-66 provides specific hydrophobic interactions with the methyl groups of PC. Similarly, Glu-81 is located on the opposite end of the pocket where it interacts well with the positively charged choline nitrogen. Present on the opposite face of the pentamer is the effector face, where the presumed <scene name='Sandbox_Reserved_474/C1q/1'>C1q</scene> and Fcγ receptors bind, and at this cleft several residues are present (<scene name='Sandbox_Reserved_474/Asp-112/1'>Asp-112</scene> and Tyr-175) which are both necessary to bind CRP to C1q [2]. |
== Mechanism == | == Mechanism == | ||
Revision as of 02:47, 3 May 2012
| This Sandbox is Reserved from 13/03/2012, through 01/06/2012 for use in the course "Proteins and Molecular Mechanisms" taught by Robert B. Rose at the North Carolina State University, Raleigh, NC USA. This reservation includes Sandbox Reserved 451 through Sandbox Reserved 500. | ||||||||||||
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C-Reactive Protein
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