Template:STRUCTURE 1tdh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1tdh]], resolution 2.10&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1tdh]], [[Resolution|resolution]] 2.10&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
|LIGAND= <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09292 Neil1-DNA_bind], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06831 H2TH], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01149 Fapy_DNA_glyco]</span>
 
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tdh OCA], [http://www.ebi.ac.uk/pdbsum/1tdh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tdh RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tdh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tdh OCA], [http://www.ebi.ac.uk/pdbsum/1tdh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tdh RCSB]</span>
|FUNCTION={{GO|id=GO:0008534 | text = oxidized purine base lesion DNA N-glycosylase activity}}{{GO|id=GO:0003684 | text = damaged DNA binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003906 | text = DNA-(apurinic or apyrimidinic site) lyase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016798 | text = hydrolase activity, acting on glycosyl bonds}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0016787 | text = hydrolase activity}}
|FUNCTION={{GO|id=GO:0008534 | text = oxidized purine base lesion DNA N-glycosylase activity}}{{GO|id=GO:0003684 | text = damaged DNA binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003906 | text = DNA-(apurinic or apyrimidinic site) lyase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016798 | text = hydrolase activity, acting on glycosyl bonds}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0016787 | text = hydrolase activity}}
Line 8: Line 7:
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010979 Ipr010979], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015886 Ipr015886], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015371 Ipr015371], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015887 Ipr015887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012319 Ipr012319]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01149 PF01149], [http://pfam.sanger.ac.uk/family?acc=PF06831 PF06831], [http://pfam.sanger.ac.uk/family?acc=PF09292 PF09292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106772 d1tdha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106773 d1tdha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106774 d1tdha3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q96FI4 Q96FI4]</span>
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010979 Ipr010979], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015886 Ipr015886], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015371 Ipr015371], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015887 Ipr015887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012319 Ipr012319]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01149 PF01149], [http://pfam.sanger.ac.uk/family?acc=PF06831 PF06831], [http://pfam.sanger.ac.uk/family?acc=PF09292 PF09292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106772 d1tdha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106773 d1tdha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=106774 d1tdha3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q96FI4 Q96FI4]</span>
-
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=NEIL1 NEIL1]</span>
+
|uPDB=1TDH|CONSURF={{!}}-
-
|CONSURF={{!}}-
+
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Revision as of 13:46, 5 June 2012

Drag the structure with the mouse to rotate
1tdh, resolution 2.10Å ()
Ligands:
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1tdh"
Personal tools