Template:STRUCTURE 3fpc
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3fpc]], [[Resolution|resolution]] 1.40Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3fpc]], [[Resolution|resolution]] 1.40Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Zn+A+353'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Cac+A+354'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Oxy+A+355'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Zn+B+353'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Cac+B+354'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Edo+B+355'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Edo+B+356'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+No3+B+357'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Edo+B+358'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Edo+B+359'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Zn+C+353'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Cac+C+354'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Imd+C+355'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Edo+C+356'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Edo+C+357'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Edo+C+358'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Edo+C+359'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Edo+C+360'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Na+C+361'>CC1</scene>, <scene name='pdbsite=CC2:Binding+Site+For+Residue+Zn+D+353'>CC2</scene>, <scene name='pdbsite=CC3:Binding+Site+For+Residue+Cac+D+354'>CC3</scene>, <scene name='pdbsite=CC4:Binding+Site+For+Residue+Edo+D+355'>CC4</scene>, <scene name='pdbsite=CC5:Binding+Site+For+Residue+Edo+D+356'>CC5</scene>, <scene name='pdbsite=CC6:Binding+Site+For+Residue+Edo+D+357'>CC6</scene>, <scene name='pdbsite=CC7:Binding+Site+For+Residue+Edo+D+358'>CC7</scene>, <scene name='pdbsite=CC8:Binding+Site+For+Residue+No3+D+359'>CC8</scene>, <scene name='pdbsite=CC9:Binding+Site+For+Residue+Edo+D+360'>CC9</scene> and <scene name='pdbsite=DC1:Binding+Site+For+Residue+Na+D+361'>DC1</scene> | ||
|LIGAND= <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |LIGAND= <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Alcohol_dehydrogenase_(NADP(+)) Alcohol dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.2 1.1.1.2] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Alcohol_dehydrogenase_(NADP(+)) Alcohol dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.2 1.1.1.2] </span> | ||
| Line 8: | Line 7: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fpc OCA], [http://www.ebi.ac.uk/pdbsum/3fpc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3fpc RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fpc OCA], [http://www.ebi.ac.uk/pdbsum/3fpc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3fpc RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011032 Ipr011032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002085 Ipr002085], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002328 Ipr002328], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013149 Ipr013149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013154 Ipr013154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016040 Ipr016040]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00107 PF00107], [http://pfam.sanger.ac.uk/family?acc=PF08240 PF08240]</span> | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011032 Ipr011032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002085 Ipr002085], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002328 Ipr002328], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013149 Ipr013149], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013154 Ipr013154], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016040 Ipr016040]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00107 PF00107], [http://pfam.sanger.ac.uk/family?acc=PF08240 PF08240]</span> | ||
| + | |uPDB=3FPC|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_3fpc_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_3fpc_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_3fpc_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_3fpc_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 10:41, 13 June 2012
| |||||||||
| 3fpc, resolution 1.40Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , , , , , | ||||||||
| Gene: | ADH1, ADH1 (Thermoanaerobacter brockii, Entamoeba histolytica) | ||||||||
| Activity: | Alcohol dehydrogenase (NADP(+)), with EC number 1.1.1.2 | ||||||||
| Related: | 3fpl | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
