This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dem
From Proteopedia
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
[[Image:2dem.png|left|200px]] | [[Image:2dem.png|left|200px]] | ||
| - | <!-- | ||
| - | The line below this paragraph, containing "STRUCTURE_2dem", creates the "Structure Box" on the page. | ||
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| - | or leave the SCENE parameter empty for the default display. | ||
| - | --> | ||
{{STRUCTURE_2dem| PDB=2dem | SCENE= }} | {{STRUCTURE_2dem| PDB=2dem | SCENE= }} | ||
===Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA=== | ===Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA=== | ||
| - | |||
| - | <!-- | ||
| - | The line below this paragraph, {{ABSTRACT_PUBMED_17870091}}, adds the Publication Abstract to the page | ||
| - | (as it appears on PubMed at http://www.pubmed.gov), where 17870091 is the PubMed ID number. | ||
| - | --> | ||
{{ABSTRACT_PUBMED_17870091}} | {{ABSTRACT_PUBMED_17870091}} | ||
==About this Structure== | ==About this Structure== | ||
| - | + | [[2dem]] is a 3 chain structure of [[DNA glycosylate]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DEM OCA]. | |
| + | |||
| + | ==See Also== | ||
| + | *[[DNA glycosylate|DNA glycosylate]] | ||
==Reference== | ==Reference== | ||
| - | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:017870091</ref><references group="xtra"/> |
| - | [[Category: Thermus thermophilus | + | [[Category: Thermus thermophilus]] |
[[Category: Hoseki, J.]] | [[Category: Hoseki, J.]] | ||
[[Category: Kosaka, H.]] | [[Category: Kosaka, H.]] | ||
| Line 32: | Line 23: | ||
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]] | [[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]] | ||
[[Category: Base excision repair]] | [[Category: Base excision repair]] | ||
| - | [[Category: Hydrolase | + | [[Category: Hydrolase-dna complex]] |
[[Category: Iron/sulfur cluster]] | [[Category: Iron/sulfur cluster]] | ||
[[Category: National project on protein structural and functional analyse]] | [[Category: National project on protein structural and functional analyse]] | ||
| Line 41: | Line 32: | ||
[[Category: Thermophile]] | [[Category: Thermophile]] | ||
[[Category: Uracil-dna glycosylase]] | [[Category: Uracil-dna glycosylase]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 07:01:20 2009'' | ||
Revision as of 10:11, 26 July 2012
Contents |
Crystal structure of Uracil-DNA glycosylase in complex with AP:A containing DNA
Template:ABSTRACT PUBMED 17870091
About this Structure
2dem is a 3 chain structure of DNA glycosylate with sequence from Thermus thermophilus. Full crystallographic information is available from OCA.
See Also
Reference
- Kosaka H, Hoseki J, Nakagawa N, Kuramitsu S, Masui R. Crystal structure of family 5 uracil-DNA glycosylase bound to DNA. J Mol Biol. 2007 Nov 2;373(4):839-50. Epub 2007 Aug 21. PMID:17870091 doi:10.1016/j.jmb.2007.08.022
Categories: Thermus thermophilus | Hoseki, J. | Kosaka, H. | Kuramitsu, S. | Masui, R. | Nakagawa, N. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Base excision repair | Hydrolase-dna complex | Iron/sulfur cluster | National project on protein structural and functional analyse | Nppsfa | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic | Thermophile | Uracil-dna glycosylase
